| BACE2 | Q9Y5Z0 | DARS-AS1-206 | ENST00000446492 | 488 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC068492.1-201 | ENST00000448672 | 469 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC090673.1-204 | ENST00000504038 | 977 nt | TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC110799.1-201 | ENST00000509098 | 449 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | ENPP7P9-201 | ENST00000514456 | 627 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SNORA40.12-201 | ENST00000516329 | 111 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | FTH1P11-201 | ENST00000517577 | 551 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC084768.1-201 | ENST00000518926 | 923 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC104232.2-201 | ENST00000519680 | 769 nt | TSL 5 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AP003072.2-201 | ENST00000527756 | 676 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | LINC02284-202 | ENST00000560924 | 566 nt | TSL 4 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC007342.4-202 | ENST00000565189 | 721 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AP001120.2-201 | ENST00000589395 | 296 nt | TSL 3 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | PPP3CB-AS1-206 | ENST00000595935 | 675 nt | TSL 5 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC013553.2-201 | ENST00000604244 | 589 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC116447.1-201 | ENST00000613153 | 453 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | C7orf77-201 | ENST00000616258 | 548 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL158801.5-201 | ENST00000623123 | 465 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | VPS8-228 | ENST00000628962 | 207 nt | TSL 5 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | OR5T1-201 | ENST00000641368 | 1118 nt | APPRIS P1 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | KMT2D-201 | ENST00000301067 | 19419 nt | APPRIS P1 TSL 5 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | A1CF-207 | ENST00000395495 | 9400 nt | TSL 5 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | DCLK1-204 | ENST00000379893 | 4612 nt | TSL 2 BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL157700.1-201 | ENST00000561973 | 1432 nt | BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | MTRR-202 | ENST00000440940 | 3215 nt | APPRIS P1 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | PTPRB-202 | ENST00000334414 | 12316 nt | APPRIS P4 TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | TMEM68-209 | ENST00000521229 | 2400 nt | TSL 1 (best) BASIC | 5.21 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | DNM3OS-201 | ENST00000417354 | 4358 nt | TSL 4 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | MT-ND4-201 | ENST00000361381 | 1378 nt | APPRIS P1 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL355306.2-205 | ENST00000635395 | 1646 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | B3GALT2-201 | ENST00000367434 | 3274 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | ZNF704-201 | ENST00000327835 | 14386 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | BDNF-AS-202 | ENST00000499568 | 2039 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | FILIP1-202 | ENST00000370020 | 4051 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | PMCH-201 | ENST00000329406 | 766 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RNA5SP505-201 | ENST00000364748 | 108 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RNU6-359P-201 | ENST00000365466 | 108 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | C9orf92-201 | ENST00000380683 | 359 nt | APPRIS P2 TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RNU6-1207P-201 | ENST00000384343 | 107 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.548-201 | ENST00000384656 | 105 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | HIGD1C-201 | ENST00000398455 | 371 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SSXP10-201 | ENST00000402595 | 565 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RNU6-1068P-201 | ENST00000410958 | 103 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC114763.2-201 | ENST00000412593 | 826 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SNRPFP1-201 | ENST00000414761 | 252 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | LINC00276-201 | ENST00000417751 | 596 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RPS15AP12-201 | ENST00000419498 | 388 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL133268.3-201 | ENST00000428903 | 577 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AF230666.1-201 | ENST00000429151 | 786 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL449983.1-201 | ENST00000430640 | 414 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RPL23AP30-201 | ENST00000432419 | 501 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | GPR143P-201 | ENST00000434155 | 205 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC005154.2-201 | ENST00000438110 | 379 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC007677.1-201 | ENST00000445757 | 515 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | CLEC4E-202 | ENST00000446457 | 701 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC079354.3-201 | ENST00000447111 | 311 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL691482.1-201 | ENST00000453255 | 87 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL034345.2-203 | ENST00000453417 | 383 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RPS5P7-201 | ENST00000456664 | 608 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC010326.1-201 | ENST00000462726 | 602 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | MTCO2P29-201 | ENST00000465212 | 189 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RPL23AP41-201 | ENST00000484754 | 458 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC083800.1-201 | ENST00000490594 | 246 nt | APPRIS P1 TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RN7SL346P-201 | ENST00000491561 | 294 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RPL23AP72-201 | ENST00000492447 | 435 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | MRPS33-209 | ENST00000496958 | 688 nt | APPRIS P1 TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | FTH1P24-201 | ENST00000503502 | 462 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC112198.3-201 | ENST00000505950 | 441 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC087241.1-201 | ENST00000508615 | 429 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.701-201 | ENST00000516812 | 110 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC084116.3-201 | ENST00000519123 | 429 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SPINK7-205 | ENST00000523535 | 299 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC024224.1-201 | ENST00000538284 | 609 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC092112.1-201 | ENST00000538329 | 640 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | TRAV30-201 | ENST00000557168 | 337 nt | APPRIS P1 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC066612.1-202 | ENST00000561094 | 518 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | LINC01290-201 | ENST00000566787 | 502 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC007599.2-201 | ENST00000573040 | 493 nt | TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | RN7SL690P-201 | ENST00000582087 | 240 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC015908.2-202 | ENST00000585243 | 756 nt | TSL 3 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC008745.1-201 | ENST00000604064 | 271 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC010424.2-201 | ENST00000607594 | 443 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SLC38A2-214 | ENST00000612232 | 1221 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC135507.2-201 | ENST00000612443 | 309 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AL356585.4-201 | ENST00000623078 | 1229 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | FRG1KP-201 | ENST00000623592 | 341 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC112204.3-201 | ENST00000623822 | 332 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC079597.1-201 | ENST00000624306 | 508 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | GVINP1-202 | ENST00000531871 | 7271 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | USP28-213 | ENST00000544967 | 3498 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | SLC25A46-206 | ENST00000509432 | 1596 nt | TSL 2 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | DNAH14-208 | ENST00000430092 | 13763 nt | APPRIS P1 TSL 5 BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | DUSP19-202 | ENST00000354221 | 5176 nt | APPRIS P1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | APAF1-205 | ENST00000547045 | 3744 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | PWRN2-202 | ENST00000567246 | 4295 nt | TSL 1 (best) BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | AC107027.3-201 | ENST00000565095 | 3473 nt | BASIC | 5.2 | □□□□□ -1.58 | | |
| BACE2 | Q9Y5Z0 | STX3-208 | ENST00000641815 | 3236 nt | BASIC | 5.19 | □□□□□ -1.58 | | |