Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL049697.2-201ENST00000403708 294 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC004987.3-201ENST00000413879 771 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 RPS12P10-201ENST00000427031 377 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC104837.2-201ENST00000427236 424 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 EZH2P1-201ENST00000431167 291 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC006466.1-201ENST00000438721 289 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC011753.3-201ENST00000443436 406 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 FAM103A2P-201ENST00000444122 354 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC006967.1-201ENST00000467608 589 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC093267.1-201ENST00000489176 961 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 OR5H5P-201ENST00000503164 928 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 RNA5SP497-201ENST00000516081 97 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AP003467.2-201ENST00000520175 319 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 OR5G4P-201ENST00000525251 760 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC016957.1-201ENST00000534895 309 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC068446.3-201ENST00000555285 382 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL161713.1-201ENST00000555538 145 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 MIR3934-201ENST00000579806 107 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC025588.3-201ENST00000604182 274 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC103710.1-201ENST00000610003 901 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC009704.2-201ENST00000618739 483 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AP001784.1-201ENST00000624107 428 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 AC099654.13-201ENST00000639774 207 ntBASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHA3Q9Y5H8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 MTND5P26-201ENST00000426018 1752 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF734P-201ENST00000419494 1534 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC019155.1-201ENST00000382242 574 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 RNA5SP397-201ENST00000391323 118 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 EIF4A1P3-201ENST00000411521 244 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 MTND6P13-201ENST00000443510 523 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 MTND1P1-201ENST00000445453 368 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 IFNWP4-201ENST00000453148 294 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 RPL35AP28-201ENST00000459730 331 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 RPS3AP41-201ENST00000462701 778 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 RPL37P6-202ENST00000464216 403 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 TMED11P-201ENST00000479478 690 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC105252.1-201ENST00000503089 286 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 NDUFB4P2-201ENST00000509515 391 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 PTP4A1P6-201ENST00000531034 478 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 RPL21P5-201ENST00000554662 472 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC137800.2-201ENST00000574375 120 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC090615.1-201ENST00000577519 154 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC008782.1-201ENST00000603386 430 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL009028.1-201ENST00000604895 802 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AC015813.4-201ENST00000610469 179 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 AL359893.1-201ENST00000447628 1580 ntBASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms