Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 SMURF2P1-201ENST00000514992 481 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC022360.1-201ENST00000521058 340 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC126177.5-201ENST00000549599 178 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 LSM6P2-201ENST00000552208 177 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 RPL10P14-201ENST00000565265 298 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC007342.5-201ENST00000571340 2142 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC007938.3-201ENST00000604965 623 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 OR6R2P-201ENST00000609216 300 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 SNORA11.6-201ENST00000619030 128 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AL049767.1-202ENST00000637826 242 ntBASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
AP4E1Q9UPM8 AC006484.1-201ENST00000435086 1884 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.112-201ENST00000363250 102 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RNU5E-8P-201ENST00000363502 116 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RN7SKP153-201ENST00000365026 316 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RNU6-1207P-201ENST00000384343 107 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RNU6-505P-201ENST00000384427 107 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 SNORA48.4-201ENST00000391089 134 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RNU6-903P-201ENST00000391270 109 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 OR3A2-201ENST00000408891 1076 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RN7SKP158-201ENST00000410453 326 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RN7SKP235-201ENST00000410662 305 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC009310.1-201ENST00000414414 451 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC079809.1-201ENST00000415468 276 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RPL36P19-201ENST00000430744 301 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 TIMM9P1-201ENST00000436122 256 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 PRPS1P1-201ENST00000445305 876 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 CBX1P2-201ENST00000453841 458 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RPL23AP11-201ENST00000475260 469 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RN7SL101P-201ENST00000496350 279 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.682-201ENST00000516457 100 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AL118558.2-201ENST00000556294 238 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC018552.3-201ENST00000567416 561 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC068790.3-201ENST00000602988 553 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AL442067.1-201ENST00000613261 223 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RMST_9.1-201ENST00000619945 193 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 CR392039.4-201ENST00000624968 501 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 AC097714.1-201ENST00000511272 1647 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 MTND4P1-201ENST00000457501 1466 ntBASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AP4E1Q9UPM8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 DHX40P1-201ENST00000588725 1412 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 AP001350.1-201ENST00000601906 1524 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.148-201ENST00000363557 117 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.193-201ENST00000363979 102 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 Y_RNA.234-201ENST00000364409 97 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 RNU6-1106P-201ENST00000390845 107 ntBASIC5.5□□□□□ -1.53
AP4E1Q9UPM8 U3.25-201ENST00000391209 220 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms