Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AL513327.3-201ENST00000602618 469 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AL161729.3-201ENST00000603533 673 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC000068.2-201ENST00000608816 460 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AL118522.2-201ENST00000616045 615 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 AC099494.2-201ENST00000623371 978 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 Z95327.2-201ENST00000414579 1873 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 MFSD8-239ENST00000641590 2479 ntBASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDC42EP3Q9UKI2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC026951.1-201ENST00000559530 2459 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 DHX40P1-201ENST00000588725 1412 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AP004607.3-201ENST00000530354 3915 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 RNA5SP335-201ENST00000363817 110 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 U3.11-201ENST00000364476 212 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.419-201ENST00000384041 102 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MIR454-201ENST00000390180 115 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 RNA5SP339-201ENST00000390987 122 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL049697.2-201ENST00000403708 294 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MTND4P19-201ENST00000446659 478 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC105399.1-202ENST00000447303 205 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MTND1P9-201ENST00000453775 944 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 RPL38P3-201ENST00000484463 213 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC083982.1-201ENST00000485679 344 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC026427.2-201ENST00000506228 536 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC110792.2-201ENST00000510278 224 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC114797.1-201ENST00000514003 728 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AP005639.2-201ENST00000527592 928 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC063949.1-201ENST00000552900 865 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4472-2-201ENST00000582069 67 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4480-201ENST00000582492 71 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC130324.3-201ENST00000614165 542 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC079684.1-201ENST00000621405 437 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 RMST_7.1-201ENST00000621935 268 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL353662.3-201ENST00000625131 237 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 AL645937.1-201ENST00000641739 1652 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 THAP12P4-201ENST00000528321 2266 ntBASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDC42EP3Q9UKI2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC114947.2-201ENST00000565748 2125 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ASNSP3-201ENST00000451989 1306 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC011493.1-201ENST00000596753 1632 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL139276.1-201ENST00000311910 1001 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.67-201ENST00000362870 100 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms