Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HMGB1P22-201ENST00000505315 124 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC016550.3-201ENST00000515706 767 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 SNORA31.26-201ENST00000517250 137 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 RNU6-711P-201ENST00000517255 106 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC012119.1-201ENST00000603184 222 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 OR52E6-202ENST00000379946 954 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 RNU6-629P-201ENST00000384061 103 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 MRPL50P2-201ENST00000416821 482 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AL356806.1-201ENST00000422524 916 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 RNF19BPX-201ENST00000426224 625 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 SYPL1P1-201ENST00000473622 768 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 FABP5P6-201ENST00000510588 409 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 RNU1-61P-201ENST00000516107 151 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 SNORD59.2-201ENST00000516873 68 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 MIR3944-201ENST00000581277 108 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC006504.3-201ENST00000586818 523 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC012493.2-201ENST00000595083 291 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC079880.2-201ENST00000603790 1213 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 GABRG2-229ENST00000641017 3628 ntBASIC2.75□□□□□ -1.97
VPS29Q9UBQ0 AC096644.4-201ENST00000563417 2912 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 NSRP1P1-201ENST00000444067 1693 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 RNU6-50P-201ENST00000362356 103 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 RNU6-98P-201ENST00000384173 107 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 RNU6-891P-201ENST00000384280 111 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 MIR181A2-201ENST00000384863 110 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 MIR887-201ENST00000401258 79 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AL138885.1-201ENST00000405921 675 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 SNORA11C-201ENST00000408532 129 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 RPL37P4-201ENST00000448908 268 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC140076.1-201ENST00000449897 361 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC083906.5-201ENST00000503722 328 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC008494.2-201ENST00000514544 370 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC024220.1-201ENST00000603675 484 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 BNIP3P7-201ENST00000605641 516 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC110792.4-201ENST00000609843 298 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AL355493.4-201ENST00000618530 292 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC022509.4-201ENST00000621404 572 ntBASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS29Q9UBQ0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AL121972.1-201ENST00000402023 252 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AL591034.1-201ENST00000407447 340 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms