Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR3651-201ENST00000630427 90 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 AL133383.2-201ENST00000622958 2336 ntBASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLCF1Q9UBD9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 DBF4P1-201ENST00000412976 1892 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 RNU6-115P-201ENST00000364310 107 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 RNA5SP167-201ENST00000365461 116 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 MIR649-201ENST00000384843 97 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 EIF5P1-201ENST00000400019 1231 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 RPL30P2-201ENST00000414021 291 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 Z99755.1-201ENST00000414048 380 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC092634.2-201ENST00000428146 1010 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC114973.1-201ENST00000429057 632 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 ARF4P2-201ENST00000430209 526 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC011242.1-201ENST00000433596 1158 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 HMGN2P21-201ENST00000447764 270 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 HMGB3P8-201ENST00000449709 577 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 NDUFA5P7-201ENST00000452914 242 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC244505.3-201ENST00000454598 187 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 BTF3P5-201ENST00000457252 467 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 HMGB1P38-201ENST00000490557 577 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC008837.1-201ENST00000511513 412 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 OR4A45P-201ENST00000529954 901 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC092470.1-201ENST00000546187 132 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC005476.1-201ENST00000554427 397 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC090330.1-201ENST00000588646 764 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AP000238.1-201ENST00000608759 426 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC018645.2-201ENST00000609151 472 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC109454.4-201ENST00000623411 649 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 AC098679.5-201ENST00000624394 571 ntBASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCF1Q9UBD9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 PWAR6-201ENST00000552334 4618 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 RNU6-921P-201ENST00000384361 107 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AL139098.1-201ENST00000407291 389 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC096533.1-201ENST00000411645 353 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC127526.1-201ENST00000417526 366 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC027644.1-201ENST00000419595 298 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 OFD1P2Y-201ENST00000421895 1149 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 RPS20P32-201ENST00000456044 356 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC078817.1-201ENST00000492623 435 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC023632.1-201ENST00000518463 375 ntBASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3□□□□□ -1.93
CLCF1Q9UBD9 UBE2NP1-201ENST00000545592 458 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms