Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AP003497.1-201ENST00000528472 562 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AP000676.2-201ENST00000529711 301 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AC123904.3-201ENST00000547218 814 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 OR1F2P-201ENST00000570470 933 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 MIR4436B2-201ENST00000581415 91 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 MIR4436B1-201ENST00000583272 91 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 UBE2L4-201ENST00000587688 464 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AC068790.3-201ENST00000602988 553 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AC025449.1-201ENST00000603896 529 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 BNIP3P10-201ENST00000605360 577 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AL596245.1-201ENST00000618994 362 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 YWHAEP7-203ENST00000622054 312 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AL158801.5-201ENST00000623123 465 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 AC099654.10-201ENST00000640395 161 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.72□□□□□ -1.65
KCMF1Q9P0J7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
KCMF1Q9P0J7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
KCMF1Q9P0J7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
KCMF1Q9P0J7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.71□□□□□ -1.65
KCMF1Q9P0J7 AC008079.2-201ENST00000623543 20396 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 SMG1P4-204ENST00000523028 4131 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 OR52B1P-201ENST00000316506 909 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 Y_RNA.86-201ENST00000363020 111 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RNA5SP123-201ENST00000363244 119 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RNY3P3-201ENST00000363816 102 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RNU6-169P-201ENST00000365336 107 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 SNORA70.10-201ENST00000384515 134 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 MIR550A3-201ENST00000390735 95 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 U3.20-201ENST00000390909 217 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RPS4XP8-201ENST00000402039 771 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 SNRPEP10-201ENST00000420249 274 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL358176.3-201ENST00000420757 454 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RPL23AP30-201ENST00000432419 501 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC108734.1-201ENST00000439549 399 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 UBDP1-202ENST00000457888 382 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RPS4XP10-201ENST00000465034 731 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC022034.3-201ENST00000471393 478 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC055855.1-201ENST00000489563 579 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RN7SL591P-201ENST00000496150 292 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 MRPS33P2-201ENST00000507850 322 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC105031.1-201ENST00000518550 476 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RPL23AP53-201ENST00000521854 457 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 OR5AN2P-201ENST00000534535 896 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC011477.5-201ENST00000586571 259 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC010338.1-201ENST00000621823 717 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL359697.1-201ENST00000624879 587 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL353662.3-201ENST00000625131 237 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC024614.3-201ENST00000637860 256 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC073869.10-201ENST00000642016 354 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AL445437.1-201ENST00000623157 3087 ntBASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
KCMF1Q9P0J7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC092326.2-201ENST00000624772 1561 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms