Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SNX18P24-201ENST00000505249 671 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC021146.3-201ENST00000511911 260 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SNORD116-26-201ENST00000516006 96 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RNU2-10P-201ENST00000516375 211 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.710-201ENST00000516975 110 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RNA5SP400-201ENST00000517155 111 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 HSPE1P20-201ENST00000538133 289 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SDR42E1P2-201ENST00000614861 481 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SDR42E1P4-201ENST00000620894 481 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 MTCO1P24-201ENST00000515438 1558 ntBASIC6□□□□□ -1.45
CUEDC1Q9NWM3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CUEDC1Q9NWM3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC123769.1-201ENST00000530992 3192 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-1159P-201ENST00000362933 107 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RN7SKP224-201ENST00000364140 325 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.462-201ENST00000384268 102 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AL024474.1-201ENST00000404655 591 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RNU4-46P-201ENST00000410818 138 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 GJA6P-201ENST00000415117 1042 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 PPIAP10-201ENST00000438675 458 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 NEFMP1-201ENST00000443423 1006 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC108059.3-201ENST00000456388 214 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC011225.1-201ENST00000457751 369 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RPL12P30-201ENST00000488389 499 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 MTCO3P44-201ENST00000510977 541 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC036111.2-201ENST00000533247 901 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC007956.1-201ENST00000555623 542 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 OR4H6P-201ENST00000563771 921 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC007566.2-201ENST00000603642 413 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AL031666.3-201ENST00000609320 1006 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AC245517.5-201ENST00000611529 162 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AL021918.2-201ENST00000613415 194 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AOX3P-204ENST00000491025 2107 ntBASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.99□□□□□ -1.45
CUEDC1Q9NWM3 AL161756.3-201ENST00000641216 2071 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 MIR323A-201ENST00000362199 86 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 SNORA41-201ENST00000384675 132 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AC016769.3-201ENST00000396562 315 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AC245884.2-201ENST00000426257 404 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AL031584.1-201ENST00000447169 754 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 IFNWP4-201ENST00000453148 294 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 RN7SL188P-201ENST00000469842 285 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 PPIAP19-201ENST00000486414 492 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 COX6B1P2-201ENST00000489624 230 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AC093852.1-201ENST00000503587 266 ntBASIC5.98□□□□□ -1.45
CUEDC1Q9NWM3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms