Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RNU6-374P-201ENST00000364146 108 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 SNORA5A-201ENST00000384111 134 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 SNORA51.6-201ENST00000384151 125 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 SNORA48.7-201ENST00000391302 135 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 EIF5P1-201ENST00000400019 1231 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 U3.39-201ENST00000408569 239 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RPS3AP37-201ENST00000419176 745 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 MRPS36P1-201ENST00000421291 307 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC018644.1-201ENST00000429934 551 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RFC5P1-201ENST00000454419 874 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 DUXAP8-207ENST00000456786 622 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RPL5P24-201ENST00000463742 885 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC108734.3-201ENST00000481241 1165 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC013828.1-201ENST00000481845 158 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC104619.4-201ENST00000510773 249 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RN7SKP116-201ENST00000516902 319 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 IGHV3-29-201ENST00000604817 344 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 DUXAP10-204ENST00000612052 616 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AC069209.1-201ENST00000619282 651 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 AL713922.2-201ENST00000619384 716 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 U7.8-201ENST00000619968 63 ntBASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.58□□□□□ -1.68
SMC4Q9NTJ3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 RNU6-339P-201ENST00000384310 107 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 PTMAP2-201ENST00000397627 327 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL024474.1-201ENST00000404655 591 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 RPL23AP47-201ENST00000408017 460 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 MTND2P16-201ENST00000419987 799 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 NANOGP2-201ENST00000435391 727 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 Z95327.1-201ENST00000446082 482 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL133547.1-201ENST00000448546 220 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 ZNF886P-201ENST00000450781 723 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC134050.1-201ENST00000495088 933 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC114322.1-201ENST00000506771 926 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC010460.2-201ENST00000509054 677 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 MTCO3P44-201ENST00000510977 541 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 RN7SKP18-201ENST00000516005 275 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 RNU6-1225P-201ENST00000516336 65 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AP003385.6-201ENST00000531603 374 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL391001.1-201ENST00000602747 715 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 RNU4-5P-201ENST00000607255 135 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC008083.4-201ENST00000615076 444 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC090116.1-201ENST00000615679 446 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AL158163.2-201ENST00000619110 700 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC023510.2-201ENST00000622162 746 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 CR392039.5-201ENST00000623201 510 ntBASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SMC4Q9NTJ3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AL359837.1-201ENST00000381357 287 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 MIR200C-201ENST00000384980 68 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 RNA5SP56-201ENST00000410277 118 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 RNU2-28P-201ENST00000410457 189 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 RN7SKP53-201ENST00000411337 315 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC009237.5-201ENST00000414271 501 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 SYF2P2-201ENST00000417620 583 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 AC002075.2-201ENST00000425207 252 ntBASIC4.56□□□□□ -1.68
SMC4Q9NTJ3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms