Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 SNORD56.3-201ENST00000363507 71 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 RNU6-1176P-201ENST00000390955 107 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL355143.1-201ENST00000407101 841 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 TRGV6-201ENST00000417928 299 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC012498.1-201ENST00000424037 437 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 DEFB130D-201ENST00000426866 237 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC073069.1-201ENST00000428657 441 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC012497.1-201ENST00000429392 575 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL831737.1-201ENST00000441288 271 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC068135.1-201ENST00000446164 246 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 TPMTP4-201ENST00000450749 678 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 RPL37P3-201ENST00000456825 293 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC008565.1-201ENST00000509046 885 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 RNU5A-7P-201ENST00000515979 116 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 OR5D17P-201ENST00000531492 978 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC139103.1-201ENST00000534696 1030 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 EIF4BP1-201ENST00000554881 351 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 LARP7P3-201ENST00000579888 337 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC006539.2-201ENST00000601729 572 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL137843.1-201ENST00000605078 385 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 uc_338.25-201ENST00000613756 156 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC018926.1-201ENST00000616335 435 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC009318.3-201ENST00000616916 503 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AP000943.4-201ENST00000622912 357 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LHX9Q9NQ69 ZNF807-201ENST00000328088 1707 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
LHX9Q9NQ69 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC025125.1-201ENST00000624743 1922 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC021755.1-201ENST00000559747 1447 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 GABPAP-201ENST00000419271 1356 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC118273.1-201ENST00000525324 3006 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 RNU1-140P-201ENST00000365040 165 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AP002784.2-201ENST00000397300 549 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC234782.4-201ENST00000417646 1048 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC006960.1-201ENST00000419980 153 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 COTL1P1-201ENST00000422309 375 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC093422.3-201ENST00000428506 305 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 NANOGNBP1-201ENST00000448444 480 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 ELOCP23-201ENST00000452014 332 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 RPS27P29-201ENST00000463110 252 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 MTCO1P30-201ENST00000515244 580 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC027104.1-201ENST00000563702 681 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC090751.1-201ENST00000566966 267 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 MIR4789-201ENST00000577469 82 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AP000919.1-202ENST00000581139 1264 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC024595.1-201ENST00000623088 387 ntBASIC3.03□□□□□ -1.92
LHX9Q9NQ69 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.03□□□□□ -1.92
LHX9Q9NQ69 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC104446.1-201ENST00000613728 1321 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AL035405.1-201ENST00000400795 710 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 SNORA11.2-201ENST00000408318 127 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 RNU2-6P-201ENST00000411404 190 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC073310.1-201ENST00000423226 1033 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 RPL23AP69-201ENST00000431134 458 ntBASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.02□□□□□ -1.93
LHX9Q9NQ69 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms