Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 VN1R88P-201ENST00000596787 292 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC010591.1-201ENST00000603941 649 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 DPRXP5-201ENST00000604662 539 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC096586.1-201ENST00000610267 561 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 VIS1.1-201ENST00000610517 203 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC083809.1-201ENST00000615051 472 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 SNHG22-203ENST00000617833 660 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AL354798.1-201ENST00000622505 329 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AP001784.1-201ENST00000624107 428 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 MIR492-201ENST00000638676 116 ntBASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VCX3AQ9NNX9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 RPL9P7-201ENST00000330965 580 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 MIR592-201ENST00000384959 97 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 U3.22-201ENST00000391120 215 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 DUTP6-201ENST00000425573 462 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AL035410.1-201ENST00000427409 427 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 UBE2V1P6-201ENST00000430840 422 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 ATP5C1P1-201ENST00000441945 895 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 RPS15AP29-201ENST00000445539 400 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 PPIAP20-201ENST00000449839 135 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AIG1P1-201ENST00000503376 148 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 TBCAP3-201ENST00000512475 312 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC026402.1-201ENST00000513642 170 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC126177.3-201ENST00000551839 688 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC090666.1-201ENST00000578241 445 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC138761.3-201ENST00000579993 334 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC091057.2-201ENST00000602594 792 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 KATNBL1P1-201ENST00000605192 748 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AL020991.1-201ENST00000612314 373 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AL162274.2-201ENST00000614406 332 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AL355810.1-201ENST00000614629 552 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 MIR7703-201ENST00000620784 77 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AL360181.4-201ENST00000621752 134 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC098679.5-201ENST00000624394 571 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 Z83843.1-201ENST00000604070 3685 ntBASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
VCX3AQ9NNX9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 OR5H2-201ENST00000355273 945 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RNU6-730P-201ENST00000383954 104 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MIR649-201ENST00000384843 97 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MIR192-201ENST00000384915 110 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MIR105-2-201ENST00000385083 81 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RNU6-77P-201ENST00000410554 91 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC009480.2-201ENST00000422916 432 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MTATP6P4-201ENST00000427725 675 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC093422.3-201ENST00000428506 305 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RNU6-775P-201ENST00000459318 96 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RPS7P7-201ENST00000463499 571 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RPL21P131-201ENST00000497298 483 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MTCYBP37-201ENST00000510642 1133 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AL020997.3-201ENST00000602843 359 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AP001330.4-201ENST00000604350 154 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AL450270.1-201ENST00000606160 391 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC073968.1-201ENST00000618594 637 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 AC127502.3-201ENST00000636170 1206 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms