Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC114781.5-201ENST00000615297 108 ntBASIC4.43□□□□□ -1.7
USP29Q9HBJ7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP29Q9HBJ7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RNA5SP479-201ENST00000364858 117 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AL583835.1-201ENST00000399570 407 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 HMGB1P17-201ENST00000403495 628 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RPS3AP9-201ENST00000417027 792 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RPL7P30-201ENST00000420888 709 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RBMY1KP-201ENST00000423480 476 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 SSXP1-201ENST00000453640 473 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 HMGB1P21-201ENST00000502313 581 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC108145.1-201ENST00000503770 153 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC093824.1-201ENST00000508796 343 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 PGBD4P4-201ENST00000509673 613 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RNU6-405P-201ENST00000516637 110 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 RN7SKP82-201ENST00000516786 223 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC104986.1-201ENST00000517978 436 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC006064.5-201ENST00000541782 248 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC141257.3-201ENST00000572906 215 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 LARP7P2-201ENST00000575306 125 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 MIR4637-201ENST00000582405 84 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 MIR548AB-201ENST00000584917 84 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 AC010857.1-201ENST00000606398 594 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 GDI2P1-201ENST00000429312 1336 ntBASIC4.42□□□□□ -1.7
USP29Q9HBJ7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP29Q9HBJ7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNA5SP388-201ENST00000362584 119 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 Y_RNA.41-201ENST00000362646 102 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNU5F-6P-201ENST00000362979 116 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNU1-85P-201ENST00000364127 164 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 ARF4P3-201ENST00000397387 509 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AL121972.1-201ENST00000402023 252 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC083875.1-201ENST00000419509 405 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AL389915.1-201ENST00000422463 466 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC105402.2-201ENST00000438503 358 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RPL23AP16-201ENST00000441715 421 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RPS26P56-201ENST00000444468 240 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 PHBP16-201ENST00000446318 950 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC114755.5-201ENST00000447760 831 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 NUTF2P3-201ENST00000448540 384 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MEMO1P3-201ENST00000459811 302 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RPS15AP17-201ENST00000470598 390 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC114981.1-201ENST00000503897 678 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MTCO1P35-201ENST00000515270 228 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 RNU6-150P-201ENST00000516237 95 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 OR4A45P-201ENST00000529954 901 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 HSPE1P3-201ENST00000559254 309 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC027807.1-201ENST00000559921 996 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms