Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC091046.3-201ENST00000631455 1574 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 NEAT1-202ENST00000501122 22743 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC099654.2-201ENST00000433031 1980 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AL445437.1-201ENST00000623157 3087 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 OR4K15-201ENST00000305051 1216 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-744P-201ENST00000365557 107 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.390-201ENST00000383932 102 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.453-201ENST00000384223 109 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 SNORA51.8-201ENST00000384234 132 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-1316P-201ENST00000384242 108 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 SSXP10-201ENST00000402595 565 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 CCNG1P1-201ENST00000406783 885 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 CHEK2P3-201ENST00000416118 248 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 RPL17P36-201ENST00000420302 549 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC009480.2-201ENST00000422916 432 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 USP9YP36-201ENST00000424581 829 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AL589872.1-201ENST00000426602 288 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AL512326.1-201ENST00000443050 721 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 MTCO3P20-201ENST00000454926 688 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AL136126.1-201ENST00000473603 402 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AP001025.2-201ENST00000490908 477 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC034222.1-201ENST00000494052 532 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 HMGB1P29-201ENST00000505659 499 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 SAP18P1-201ENST00000512058 390 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC010493.1-201ENST00000513479 292 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 MIR5699-201ENST00000578903 90 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 MIR4284-201ENST00000578924 81 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 DUXAP4-201ENST00000603046 613 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 RPL23AP92-201ENST00000603609 255 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AP000907.4-201ENST00000604143 237 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AC004067.1-201ENST00000608733 700 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 AL359880.1-201ENST00000621879 266 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 CR848007.1-201ENST00000442354 1699 ntBASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
AMBRA1Q9C0C7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL031119.1-201ENST00000404707 1879 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL450326.2-201ENST00000421913 1962 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 GNG5P1-201ENST00000255500 204 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RNY4P14-201ENST00000363656 96 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 CALM2P3-201ENST00000400429 449 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-195P-201ENST00000411352 109 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 USP9YP6-201ENST00000413550 854 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 MTCYBP24-201ENST00000420387 1106 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 EIF4EP1-201ENST00000422311 642 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 FCF1P1-201ENST00000432690 571 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 PLGLA-201ENST00000465668 449 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 RPS3AP14-201ENST00000483907 780 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC074344.1-201ENST00000512823 224 ntBASIC4.37□□□□□ -1.71
AMBRA1Q9C0C7 AC008549.1-201ENST00000512900 643 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms