Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 HSPD1P16-201ENST00000402302 394 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL359634.1-202ENST00000404721 284 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 RN7SL197P-201ENST00000466981 299 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC005532.2-201ENST00000467154 373 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 VN1R105P-201ENST00000486595 910 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 SNORD60.2-201ENST00000516883 86 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 RNU6-835P-201ENST00000516974 104 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC137627.1-201ENST00000545761 289 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AL031320.1-201ENST00000604177 357 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 MIR7155-201ENST00000615925 56 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 uc_338.11-201ENST00000619132 160 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 DUXAP9-208ENST00000622815 614 ntBASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRAIPQ9BWF2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 BDP1P-201ENST00000582658 1990 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 RNU6-629P-201ENST00000384061 103 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 MT-TL1-201ENST00000386347 75 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 RNU1-77P-201ENST00000390868 162 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC138393.2-201ENST00000414742 246 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 RPL30P16-201ENST00000419341 429 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 CYCSP6-201ENST00000434498 302 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 RPL23AP43-201ENST00000446445 471 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 MTND5P20-201ENST00000448677 143 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 RPL5P30-201ENST00000465511 891 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 NIPA2P2-201ENST00000496376 1083 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC072052.1-201ENST00000496556 306 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC007016.1-201ENST00000512110 244 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC109635.4-202ENST00000531666 412 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AL136295.6-201ENST00000610486 658 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 MTND4P14-201ENST00000435799 1354 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AC006020.1-201ENST00000420179 1854 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6□□□□□ -1.45
TRAIPQ9BWF2 AP001273.1-201ENST00000624493 3152 ntBASIC6□□□□□ -1.45
TRAIPQ9BWF2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRAIPQ9BWF2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 MIR133B-201ENST00000362210 119 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 RNU6-188P-201ENST00000364207 107 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 SNORA70-201ENST00000384436 135 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC005042.1-201ENST00000393397 800 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 EIF1P3-201ENST00000423841 334 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 MTCO1P39-201ENST00000426148 480 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 AC008850.1-201ENST00000427546 362 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.99□□□□□ -1.45
TRAIPQ9BWF2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms