Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-908P-201ENST00000410160 94 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SKP106-201ENST00000410832 272 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RAB28P1-201ENST00000411517 641 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 E2F6P2-201ENST00000420708 748 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 EIF4HP2-201ENST00000424380 563 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL23AP4-201ENST00000427757 463 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AL353597.2-202ENST00000434901 373 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC011753.3-201ENST00000443436 406 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC104651.2-201ENST00000447549 528 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SKP13-201ENST00000515933 244 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-277P-201ENST00000516272 106 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-885P-201ENST00000516607 104 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 HMGB1P19-201ENST00000517578 577 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 TRMT10BP1-201ENST00000519377 943 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC105029.1-201ENST00000520250 669 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC022878.1-201ENST00000530684 149 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC013828.2-201ENST00000532487 235 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AL355836.1-201ENST00000555951 870 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RN7SL435P-201ENST00000584418 282 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-88P-201ENST00000606801 100 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AL158801.5-201ENST00000623123 465 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC138305.3-201ENST00000624988 240 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC107982.1-201ENST00000507171 1300 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 AC027290.2-201ENST00000623210 18662 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 Z95327.2-201ENST00000414579 1873 ntBASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDK5RAP1Q96SZ6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 LINC01109-201ENST00000603837 3081 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RNA5SP443-201ENST00000363083 132 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 U8.3-201ENST00000363321 132 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SNORD113.2-201ENST00000364166 89 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RNU6-878P-201ENST00000384578 110 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AL049697.2-201ENST00000403708 294 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SNORA11C-201ENST00000408532 129 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL26P29-201ENST00000415623 438 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC073136.2-201ENST00000417282 849 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 BX890604.2-201ENST00000427883 474 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 HMGB3P9-201ENST00000441799 583 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 FGF7P3-201ENST00000454645 303 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 C1DP4-201ENST00000455429 424 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SNRPFP4-201ENST00000456366 242 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL7P48-201ENST00000461513 746 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL23AP72-201ENST00000492447 435 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 RPL36AP41-201ENST00000493820 306 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 HMGB1P28-201ENST00000507778 552 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC108120.2-201ENST00000512973 294 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC243972.3-201ENST00000539655 198 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC007424.1-203ENST00000554613 687 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 TRAV15-201ENST00000556680 249 ntBASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.89□□□□□ -1.63
CDK5RAP1Q96SZ6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms