Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL645733.1-201ENST00000402250 217 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 RPS4XP7-201ENST00000406274 780 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC023818.1-201ENST00000498379 384 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AL359273.1-201ENST00000510918 627 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC008958.1-201ENST00000511047 682 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 RAB9BP1-201ENST00000519581 626 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AL133271.1-201ENST00000538229 291 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 MIR5095-201ENST00000578844 88 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC006363.1-201ENST00000603806 463 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.68□□□□□ -1.34
LRCH3Q96II8 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 HAUS6P2-201ENST00000433254 2404 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 IRF5P1-201ENST00000504852 2164 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 AC027088.4-201ENST00000611559 1947 ntBASIC6.68□□□□□ -1.34
LRCH3Q96II8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LRCH3Q96II8 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC009120.2-204ENST00000621548 2032 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AL121768.1-201ENST00000613917 2544 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 RNU6-1020P-201ENST00000363684 107 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 Y_RNA.398-201ENST00000383952 99 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AL080315.1-201ENST00000406055 466 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC140479.3-201ENST00000418944 1126 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC245884.2-201ENST00000426257 404 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC005094.1-201ENST00000440420 368 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 RPSAP50-201ENST00000481955 852 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC063949.1-201ENST00000552900 865 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 SULT1C2P2-201ENST00000562517 294 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC011921.3-201ENST00000605540 361 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 AC104465.1-201ENST00000611365 139 ntBASIC6.67□□□□□ -1.34
LRCH3Q96II8 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
LRCH3Q96II8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LRCH3Q96II8 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 RNA5SP65-201ENST00000363166 119 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 Y_RNA.383-201ENST00000383855 97 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 MIR223-201ENST00000385204 110 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 Y_RNA.626-201ENST00000411288 95 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms