Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RPL17P12-201ENST00000413391 526 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC092647.1-201ENST00000420654 287 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 TAAR7P-201ENST00000436141 242 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL451074.3-201ENST00000437709 472 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 MTCO3P11-201ENST00000455103 774 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 ARPC3P2-201ENST00000457786 533 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 RPL21P126-201ENST00000470049 478 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AP000797.1-201ENST00000478870 387 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 RPS3AP14-201ENST00000483907 780 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 RPL23AP53-201ENST00000521854 457 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC022790.1-201ENST00000522872 204 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC005868.1-201ENST00000536421 331 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL355836.1-201ENST00000555951 870 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 MIR3668-201ENST00000582138 75 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 MIR3939-201ENST00000582614 106 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 AL158196.1-201ENST00000616786 434 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC116563.2-201ENST00000624751 535 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 MIR1321-201ENST00000637766 79 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 AC025031.4-201ENST00000621248 3271 ntBASIC4.77□□□□□ -1.65
CHFRQ96EP1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHFRQ96EP1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHFRQ96EP1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.77□□□□□ -1.65
CHFRQ96EP1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHFRQ96EP1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 RNU5F-7P-201ENST00000363696 115 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 Y_RNA.216-201ENST00000364205 93 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 Y_RNA.296-201ENST00000364930 108 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 AL359643.1-201ENST00000404109 423 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 MIR1193-201ENST00000408109 78 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 USP9YP27-201ENST00000418455 438 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 RPL7P57-201ENST00000423238 740 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 YWHAEP5-201ENST00000431545 765 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC092170.1-201ENST00000440211 356 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 IPO7P1-201ENST00000442031 636 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 HMGB1P16-201ENST00000447155 540 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 PDSS1P2-201ENST00000449397 678 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AL356981.1-201ENST00000454879 684 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 RPL23AP24-201ENST00000458203 385 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 RPL38P1-201ENST00000460914 211 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC073073.1-201ENST00000493920 463 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 KLRA1P-201ENST00000503499 986 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 RNU6-1308P-201ENST00000516817 103 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 MTCO2P4-201ENST00000517968 247 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC008802.1-201ENST00000519121 791 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 OR4C2P-201ENST00000530855 1064 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC022882.1-201ENST00000532142 501 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC078814.3-201ENST00000553036 491 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 AC020661.2-201ENST00000560114 134 ntBASIC4.76□□□□□ -1.65
CHFRQ96EP1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHFRQ96EP1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.76□□□□□ -1.65
CHFRQ96EP1 DDX18P4-201ENST00000511690 1966 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms