Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 SNORD116-26-201ENST00000516006 96 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 MED28P5-201ENST00000528254 438 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 CCNG2P1-201ENST00000549521 1000 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AC234778.2-201ENST00000566241 354 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 CR381653.2-201ENST00000624041 768 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AC124864.2-201ENST00000624736 186 ntBASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CTHRC1Q96CG8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CTHRC1Q96CG8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.21□□□□□ -1.73
CTHRC1Q96CG8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.21□□□□□ -1.73
CTHRC1Q96CG8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CTHRC1Q96CG8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RNU1-32P-201ENST00000363937 159 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RNA5SP332-201ENST00000391063 115 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RPL17P50-201ENST00000396131 546 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RPS3AP36-201ENST00000398190 775 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 GLULP6-201ENST00000399502 913 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 GSTA9P-201ENST00000406231 611 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 BX295541.1-201ENST00000417774 250 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC069213.2-201ENST00000420238 366 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 UQCRBP1-201ENST00000421129 336 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 MTND4P18-201ENST00000447010 465 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RPL7P52-201ENST00000449200 742 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AP1S2P1-201ENST00000457344 379 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 snoU13.8-201ENST00000458890 104 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AP001992.1-205ENST00000462248 379 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC006463.2-201ENST00000473326 348 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RN7SL459P-201ENST00000481078 302 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 MTND1P3-201ENST00000484956 952 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC108022.1-201ENST00000493466 478 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 KCTD9P5-201ENST00000504141 1170 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC010493.1-201ENST00000513479 292 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC093677.1-201ENST00000514414 678 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC016065.2-201ENST00000514530 444 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RNA5SP464-201ENST00000516251 108 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 RNU6-201P-201ENST00000517100 61 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC024224.1-201ENST00000538284 609 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC124947.2-202ENST00000552735 133 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC069061.3-201ENST00000582254 823 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC068790.4-201ENST00000602474 263 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC025588.3-201ENST00000604182 274 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC010857.1-201ENST00000606398 594 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AF250324.2-201ENST00000608299 610 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 OR10AB1P-201ENST00000609613 938 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC019193.2-201ENST00000610012 634 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AL592295.2-201ENST00000612578 206 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 MIR6891-201ENST00000618788 93 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC010149.2-201ENST00000637608 315 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 AC099654.13-201ENST00000639774 207 ntBASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.21□□□□□ -1.74
CTHRC1Q96CG8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 FRG1BP-201ENST00000278882 761 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 MIR195-201ENST00000385194 87 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 CYCSP10-201ENST00000417973 294 ntBASIC4.2□□□□□ -1.74
CTHRC1Q96CG8 AL592293.2-201ENST00000422292 996 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms