Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 MAPK10-373ENST00000641983 6772 ntBASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHMP4CQ96CF2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 RNU6-289P-201ENST00000364093 107 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 MTATP6P27-201ENST00000416987 621 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 MTCO2P5-201ENST00000422621 426 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AL512286.1-201ENST00000439244 400 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 MTND5P14-201ENST00000441481 1267 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC005297.2-201ENST00000450430 606 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 BX322784.1-201ENST00000455793 1077 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC106872.3-201ENST00000495104 446 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 NUP58P1-201ENST00000502546 1738 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC025445.1-201ENST00000502728 300 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC108475.1-201ENST00000507880 950 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 RNA5SP519-201ENST00000516480 119 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC106871.1-201ENST00000568324 3102 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC053481.3-201ENST00000577881 843 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC090229.1-201ENST00000590983 1609 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 LLPHP1-201ENST00000603571 367 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC068831.8-201ENST00000620171 435 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC074029.4-201ENST00000624796 1859 ntBASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHMP4CQ96CF2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 Y_RNA.201-201ENST00000364052 96 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 RNU6-730P-201ENST00000383954 104 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 OFD1P18Y-201ENST00000420889 959 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 RPL23AP38-201ENST00000423801 469 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 RPL29P29-201ENST00000448725 423 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC116337.2-201ENST00000477662 156 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 MTCO1P35-201ENST00000515270 228 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 Y_RNA.695-201ENST00000516715 107 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 MRPL49P2-201ENST00000521066 465 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 OR6C7P-201ENST00000547875 934 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC069240.1-201ENST00000548774 375 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 GTF2IP22-201ENST00000554443 182 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC010680.4-201ENST00000605334 543 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC090186.1-201ENST00000605991 572 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 MIR432-201ENST00000606207 94 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AL391497.1-201ENST00000608671 547 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC103710.4-201ENST00000609301 899 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AL357080.1-201ENST00000617394 239 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC004009.2-201ENST00000623016 728 ntBASIC5.09□□□□□ -1.59
CHMP4CQ96CF2 AC068724.3-201ENST00000625906 87 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms