Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AP000254.1-201ENST00000609934 520 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 LINC00901.1-201ENST00000617252 152 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AC012314.7-201ENST00000619693 93 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AL354798.1-201ENST00000622505 329 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AL359715.5-201ENST00000623431 443 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AL596275.2-204ENST00000641628 552 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AL596275.2-206ENST00000641957 626 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM43Q96BQ3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 AL022578.1-201ENST00000439330 1433 ntBASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 Z73965.1-201ENST00000623412 2297 ntBASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 AL359922.3-201ENST00000624779 1670 ntBASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 SAGE4P-201ENST00000442271 3381 ntBASIC4.65□□□□□ -1.66
TRIM43Q96BQ3 OR52B1P-201ENST00000316506 909 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 RPL17P12-201ENST00000413391 526 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 RPL31P2-201ENST00000413849 377 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AL035410.1-201ENST00000427409 427 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AL353748.1-201ENST00000440753 474 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 RPS3AP12-201ENST00000443616 753 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 RNA5SP269-201ENST00000459032 137 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC087385.1-201ENST00000475062 312 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC024589.1-201ENST00000512207 263 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 RN7SKP277-201ENST00000516895 283 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AP004247.1-201ENST00000531556 1289 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC013828.2-201ENST00000532487 235 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 OR6C7P-201ENST00000547875 934 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 BBIP1P1-201ENST00000602999 279 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC087752.4-201ENST00000605911 462 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC008013.2-202ENST00000637965 364 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 MTND4P4-201ENST00000439033 1366 ntBASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM43Q96BQ3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC074029.4-201ENST00000624796 1859 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC011755.1-201ENST00000623763 2049 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 RNU6-289P-201ENST00000364093 107 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 OR5H15-201ENST00000383696 930 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 RNU1-63P-201ENST00000383902 164 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 RNU6-952P-201ENST00000391164 108 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC068533.1-201ENST00000418542 415 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC004448.2-201ENST00000422360 586 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC104333.2-201ENST00000422630 192 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 LSM1P1-201ENST00000438629 273 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 MTND5P14-201ENST00000441481 1267 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 ST13P20-201ENST00000447996 1065 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 MTCO1P27-201ENST00000448269 226 ntBASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM43Q96BQ3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms