Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC068790.5-201ENST00000602741 355 ntBASIC5.49□□□□□ -1.53
BRF1Q92994 AL162413.1-201ENST00000603198 110 ntBASIC5.49□□□□□ -1.53
BRF1Q92994 AL161734.1-201ENST00000609720 557 ntBASIC5.49□□□□□ -1.53
BRF1Q92994 AL136295.6-201ENST00000610486 658 ntBASIC5.49□□□□□ -1.53
BRF1Q92994 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 FER-210ENST00000628534 558 ntTSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BRF1Q92994 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRF1Q92994 AC104260.2-201ENST00000623551 3497 ntBASIC5.49□□□□□ -1.53
BRF1Q92994 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
BRF1Q92994 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRF1Q92994 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
BRF1Q92994 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRF1Q92994 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.49□□□□□ -1.53
BRF1Q92994 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BRF1Q92994 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BRF1Q92994 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AC010928.1-201ENST00000592477 1447 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
BRF1Q92994 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 AL049780.3-201ENST00000624612 1583 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
BRF1Q92994 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 Y_RNA.509-201ENST00000384506 99 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 Y_RNA.535-201ENST00000384612 99 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 RPL23AP32-201ENST00000395315 459 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AL023807.1-201ENST00000407932 359 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 RNU6-908P-201ENST00000410160 94 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 JKAMPP1-201ENST00000413804 919 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 BX510359.2-201ENST00000417920 305 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AC140479.3-201ENST00000418944 1126 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AL353777.1-201ENST00000425552 326 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.48□□□□□ -1.53
BRF1Q92994 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 RPL36AP41-201ENST00000493820 306 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF1Q92994 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC018797.3-201ENST00000513388 1241 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 RNA5SP464-201ENST00000516251 108 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AC022616.6-201ENST00000520479 119 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF1Q92994 CENPUP1-201ENST00000526649 1202 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF1Q92994 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.48□□□□□ -1.53
BRF1Q92994 ANP32BP3-201ENST00000559213 706 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC044792.1-201ENST00000593294 196 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AL035413.2-201ENST00000604801 525 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 AC009237.17-201ENST00000618111 748 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 AC010338.1-201ENST00000621823 717 ntBASIC5.48□□□□□ -1.53
BRF1Q92994 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
BRF1Q92994 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRF1Q92994 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 AL590240.1-201ENST00000334118 313 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 Y_RNA.159-201ENST00000363674 87 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 RNU6-1322P-201ENST00000364309 107 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 RNU6-343P-201ENST00000364709 104 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 RNU6-878P-201ENST00000384578 110 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AL031679.1-201ENST00000400616 525 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF1Q92994 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF1Q92994 AL353193.1-201ENST00000421444 268 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF1Q92994 Z74021.1-201ENST00000423610 407 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC009965.2-201ENST00000425328 970 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AL513185.2-201ENST00000425543 193 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC096632.1-201ENST00000427395 310 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 OR51AB1P-201ENST00000429046 620 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF1Q92994 FAM103A2P-201ENST00000444122 354 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AL136380.1-201ENST00000447970 162 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 RAD23BP3-201ENST00000454157 1152 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms