Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC244098.2-201ENST00000422068 99 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 MUPP-201ENST00000438111 566 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 Z77249.1-201ENST00000444622 1175 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AL590399.6-201ENST00000446396 307 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 RPL7P5-201ENST00000471472 736 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 RPS3AP43-201ENST00000479743 781 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC104687.1-201ENST00000485829 412 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 RN7SL504P-201ENST00000494496 287 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AL355836.1-201ENST00000555951 870 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 GTF2IP8-201ENST00000560687 584 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC090751.1-201ENST00000566966 267 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 MTCO3P13-201ENST00000577757 781 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 MAGOH2P-202ENST00000584384 429 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC012493.2-201ENST00000595083 291 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AL133393.1-201ENST00000603277 287 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 AC079880.2-201ENST00000603790 1213 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 MTND4P34-201ENST00000572715 1371 ntBASIC2.57□□□□□ -2
RPS4Y2Q8TD47 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
RPS4Y2Q8TD47 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 METTL21EP-201ENST00000298105 713 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 SNORA7.2-201ENST00000364446 145 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AL355379.1-201ENST00000405542 640 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 EI24P1-201ENST00000416584 867 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RPL7P46-201ENST00000425129 740 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AL445528.1-201ENST00000426330 420 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC011242.1-201ENST00000433596 1158 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RPL7P29-201ENST00000437151 728 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 HMGN2P20-201ENST00000437531 273 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 HMGB1P48-201ENST00000446155 598 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AL162389.1-201ENST00000449233 177 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RPS15AP1-201ENST00000457423 391 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 snoU13.7-201ENST00000459220 104 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RPL5P24-201ENST00000463742 885 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MTND3P6-201ENST00000485242 339 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 SNORA74D-201ENST00000516404 141 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RNU6-889P-201ENST00000517189 103 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AF279873.1-201ENST00000523393 313 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC004923.2-201ENST00000529649 369 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MIR4474-201ENST00000579189 78 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 AC090616.5-202ENST00000582111 297 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MIR8057-201ENST00000620957 69 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 MTND5P7-201ENST00000413558 1798 ntBASIC2.56□□□□□ -2
RPS4Y2Q8TD47 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPS4Y2Q8TD47 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPS4Y2Q8TD47 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
RPS4Y2Q8TD47 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.55□□□□□ -2
RPS4Y2Q8TD47 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RPS4Y2Q8TD47 SNORA9-201ENST00000384215 133 ntBASIC2.55□□□□□ -2
RPS4Y2Q8TD47 MIR181A2-201ENST00000384863 110 ntBASIC2.55□□□□□ -2
RPS4Y2Q8TD47 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
RPS4Y2Q8TD47 BTBD10P2-201ENST00000404779 676 ntBASIC2.55□□□□□ -2
RPS4Y2Q8TD47 AL354719.1-201ENST00000406535 843 ntBASIC2.55□□□□□ -2
RPS4Y2Q8TD47 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.55□□□□□ -2
RPS4Y2Q8TD47 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms