Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CDH12P4-201ENST00000517835 295 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 CDH12P3-201ENST00000517935 295 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 CDH12P1-201ENST00000518435 295 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC104576.1-201ENST00000524225 88 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC136932.1-201ENST00000574771 208 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 BX322639.1-202ENST00000423987 2213 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 Z75746.1-201ENST00000440243 2080 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC022034.1-201ENST00000512867 2156 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RNU6-946P-201ENST00000383878 107 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AL139039.1-201ENST00000401900 692 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 MIR1178-201ENST00000408396 91 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RN7SKP281-201ENST00000410472 352 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RNU4-78P-201ENST00000410940 126 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC023141.3-201ENST00000436698 278 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 PPIAP10-201ENST00000438675 458 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RN7SL369P-201ENST00000477138 299 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RPL21P103-201ENST00000479921 488 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC087190.1-201ENST00000484462 480 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC107032.1-201ENST00000485945 480 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 MRPS18CP4-201ENST00000535821 231 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AL590099.1-201ENST00000615276 138 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AL445437.1-201ENST00000623157 3087 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 RLIMP1-201ENST00000339626 1680 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 AC130650.2-201ENST00000618736 2403 ntBASIC6.03□□□□□ -1.44
SNIP1Q8TAD8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.44
SNIP1Q8TAD8 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SNIP1Q8TAD8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNA5SP273-201ENST00000362484 113 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNA5SP110-201ENST00000362638 115 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNA5SP333-201ENST00000363466 118 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNA5SP334-201ENST00000364825 118 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNY4P28-201ENST00000365281 93 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNU6-790P-201ENST00000384479 105 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 SNORA53-201ENST00000391141 249 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 BX842559.1-201ENST00000419615 532 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AC093655.2-201ENST00000425735 631 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AC087650.1-201ENST00000431445 468 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 TPT1P13-201ENST00000449760 499 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 FABP5P13-201ENST00000452144 328 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 RN7SL834P-201ENST00000461450 286 ntBASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.02□□□□□ -1.45
SNIP1Q8TAD8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms