Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
USP38Q8NB14 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 RNVU1-3-201ENST00000364313 161 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 MIR153-1-201ENST00000384914 90 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 MIR506-201ENST00000384998 124 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP38Q8NB14 SNORA48.2-201ENST00000390926 124 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 RAP1BP1-201ENST00000412709 553 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 SYF2P2-201ENST00000417620 583 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC011233.1-201ENST00000422812 283 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 FTH1P6-201ENST00000430768 320 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.49□□□□□ -1.69
USP38Q8NB14 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.49□□□□□ -1.69
USP38Q8NB14 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.49□□□□□ -1.69
USP38Q8NB14 AC104073.1-201ENST00000451988 151 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.49□□□□□ -1.69
USP38Q8NB14 AL109741.2-201ENST00000455561 343 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 NCOR1P1-202ENST00000486162 291 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 RPL7P38-201ENST00000488396 739 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.49□□□□□ -1.69
USP38Q8NB14 AL358832.1-201ENST00000497800 389 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP38Q8NB14 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.49□□□□□ -1.69
USP38Q8NB14 IGKV2D-19-201ENST00000523346 262 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 OR4A45P-201ENST00000529954 901 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
USP38Q8NB14 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.49□□□□□ -1.69
USP38Q8NB14 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.49□□□□□ -1.69
USP38Q8NB14 AC125611.1-201ENST00000549563 229 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC063950.1-201ENST00000552036 308 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AL389895.1-201ENST00000554127 252 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.49□□□□□ -1.69
USP38Q8NB14 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 AL133507.1-201ENST00000605269 557 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC245297.2-201ENST00000610119 565 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 AC008083.4-201ENST00000615076 444 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
USP38Q8NB14 LINC00561-201ENST00000565815 2738 ntBASIC4.49□□□□□ -1.69
USP38Q8NB14 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP38Q8NB14 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP38Q8NB14 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP38Q8NB14 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP38Q8NB14 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC018555.1-201ENST00000567548 1980 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 Y_RNA.500-201ENST00000384466 111 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC016769.3-201ENST00000396562 315 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 MIR1284-201ENST00000408337 120 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 RN7SKP156-201ENST00000410308 342 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 SNORA57.3-201ENST00000411095 141 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC115115.1-201ENST00000449927 248 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 HMGB3P22-202ENST00000451823 572 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC092045.1-201ENST00000495716 1231 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AL139099.1-201ENST00000497398 403 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 XKRY-201ENST00000510392 1100 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC005798.1-201ENST00000513715 387 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 RNU6-583P-201ENST00000516012 92 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.48□□□□□ -1.69
USP38Q8NB14 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.48□□□□□ -1.69
USP38Q8NB14 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 MIR5684-201ENST00000585074 65 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 OR4G1P-201ENST00000588632 938 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.48□□□□□ -1.69
USP38Q8NB14 AC025811.1-201ENST00000604312 472 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AL592221.1-201ENST00000605266 382 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AL513477.2-201ENST00000607858 568 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.48□□□□□ -1.69
USP38Q8NB14 MIR7975-201ENST00000619350 68 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 MIR7702-201ENST00000621931 59 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AC231657.1-201ENST00000624313 397 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 AP005264.7-201ENST00000625003 745 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.48□□□□□ -1.69
USP38Q8NB14 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 MIR3651-201ENST00000630427 90 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP38Q8NB14 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP38Q8NB14 ZNF833P-201ENST00000424938 1494 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.48□□□□□ -1.69
USP38Q8NB14 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
USP38Q8NB14 ZNF33CP-201ENST00000432492 2030 ntBASIC4.48□□□□□ -1.69
USP38Q8NB14 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP38Q8NB14 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.48□□□□□ -1.69
USP38Q8NB14 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP38Q8NB14 ZNF542P-204ENST00000482727 1305 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms