Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC023509.5-201ENST00000617434 807 ntBASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 AC011155.2-201ENST00000623202 216 ntBASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 AC007842.1-201ENST00000597336 2039 ntBASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 AC134882.1-201ENST00000603738 1676 ntBASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 AC074029.4-201ENST00000624796 1859 ntBASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NPAS3Q8IXF0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RNU6-251P-201ENST00000363235 104 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RNU4-50P-201ENST00000364361 141 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RNU6-1317P-201ENST00000364582 104 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RNY3P13-201ENST00000365542 102 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RNU6-441P-201ENST00000384545 106 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 SNORA41-201ENST00000384675 132 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AL031679.1-201ENST00000400616 525 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC097374.1-203ENST00000400783 485 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MYL6P5-201ENST00000412707 459 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AL136097.1-201ENST00000456945 913 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RPL21P104-201ENST00000464143 478 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MRE11P1-201ENST00000464884 2127 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC104563.1-201ENST00000476147 376 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RPL7P6-201ENST00000480903 738 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC007494.1-201ENST00000562293 760 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MIR3144-201ENST00000579460 79 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AL356274.1-201ENST00000617064 410 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AC103705.1-201ENST00000619013 241 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 ZNF402P-201ENST00000404435 3100 ntBASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
NPAS3Q8IXF0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 C4BPAP1-201ENST00000415474 1893 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 HSPD1P8-201ENST00000400121 1658 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 RNU6-1255P-201ENST00000363434 112 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 RNU6-1303P-201ENST00000364841 107 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 Y_RNA.353-201ENST00000365440 108 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 Y_RNA.398-201ENST00000383952 99 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 SPTLC1P2-201ENST00000407089 121 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 RNU4-34P-201ENST00000410431 124 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 RNU6-272P-201ENST00000411028 104 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 HMGA1P8-201ENST00000414130 321 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 EIF4EP2-201ENST00000422816 654 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC096920.1-201ENST00000423991 241 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 RPL7P37-201ENST00000425095 738 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC113412.1-201ENST00000425840 504 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC010154.1-201ENST00000425857 269 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AL031663.1-201ENST00000437445 219 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AL663074.2-201ENST00000440621 479 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 CEACAMP7-201ENST00000444105 496 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC116533.1-201ENST00000459748 321 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC087477.1-201ENST00000465747 340 ntBASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.05□□□□□ -1.44
NPAS3Q8IXF0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms