Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 RN7SL738P-201ENST00000470264 297 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 RPL30P11-201ENST00000495304 339 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC006499.2-201ENST00000513470 337 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC087683.1-201ENST00000591187 441 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AL139286.1-201ENST00000604465 483 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC009237.17-201ENST00000618111 748 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 AL603839.4-201ENST00000624658 1005 ntBASIC4.32□□□□□ -1.72
RFX6Q8HWS3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX6Q8HWS3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 SNORA37-201ENST00000384504 129 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 Y_RNA.517-201ENST00000384551 106 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MIR585-201ENST00000384887 94 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RPS4XP9-201ENST00000405151 780 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL133384.1-201ENST00000412744 351 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL389915.1-201ENST00000422463 466 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 C8orf59P1-201ENST00000429930 303 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC068287.1-201ENST00000430283 295 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RPL36P19-201ENST00000430744 301 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC023347.2-201ENST00000433994 462 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC069285.2-201ENST00000440210 275 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MTND4P25-201ENST00000441039 533 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL592447.1-201ENST00000447592 540 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 SSXP1-201ENST00000453640 473 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MEMO1P3-201ENST00000459811 302 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AP000893.1-201ENST00000474462 794 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC018797.3-201ENST00000513388 1241 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MTND5P4-201ENST00000514978 288 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RNU6-150P-201ENST00000516237 95 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 RNU6-720P-201ENST00000516363 108 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 MYL12AP1-201ENST00000518490 515 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 LSM6P2-201ENST00000552208 177 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC022655.2-201ENST00000577280 318 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC083760.1-201ENST00000589621 670 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AL136363.2-201ENST00000604173 851 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 AC073534.2-201ENST00000620377 381 ntBASIC4.31□□□□□ -1.72
RFX6Q8HWS3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX6Q8HWS3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms