Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 RNU5E-1-201ENST00000362477 120 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 RNU4-79P-201ENST00000362764 141 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 RN7SKP227-201ENST00000364445 330 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 RPL21P67-201ENST00000402896 478 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AL590004.1-201ENST00000405321 300 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 FTLP19-201ENST00000433300 394 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 USP9YP15-201ENST00000442391 422 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 SNORA40.12-201ENST00000516329 111 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC134698.5-201ENST00000519444 336 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC034105.3-201ENST00000565294 442 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 MIR3167-201ENST00000579623 85 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 RPL23AP92-201ENST00000603609 255 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC024940.5-201ENST00000622889 474 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 AC091046.3-201ENST00000631455 1574 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 NUP58P1-201ENST00000502546 1738 ntBASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
USPL1Q5W0Q7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RNY1P12-201ENST00000364251 105 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RNU6-853P-201ENST00000364306 107 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 SNORD81.2-201ENST00000365153 76 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 SNORA20.2-201ENST00000383922 131 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RNA5SP397-201ENST00000391323 118 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AL645608.4-201ENST00000423619 154 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 SAR1AP4-201ENST00000429225 591 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC005534.2-201ENST00000431047 433 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AL365400.1-201ENST00000431854 640 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 CBWD4P-201ENST00000445695 655 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC140076.1-201ENST00000449897 361 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RPS17P2-201ENST00000461663 408 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RPL7AP28-201ENST00000464513 571 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RPL23AP41-201ENST00000484754 458 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC093278.1-201ENST00000494700 600 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC010587.1-201ENST00000505809 469 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 ENPP7P11-201ENST00000505915 627 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC018797.3-201ENST00000513388 1241 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 HMGB1P6-201ENST00000569046 646 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AL132765.2-201ENST00000610812 351 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 OR2L1P-202ENST00000641567 1023 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC010329.2-201ENST00000595195 2737 ntBASIC6.12□□□□□ -1.43
USPL1Q5W0Q7 AC004656.1-201ENST00000568479 4951 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 OR5J1P-201ENST00000313544 939 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 RNA5SP515-201ENST00000364570 118 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 SNORA69-201ENST00000383895 132 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 Y_RNA.431-201ENST00000384086 102 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 RN7SKP27-201ENST00000410684 333 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 AC078974.1-201ENST00000411597 223 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 TAAR7P-201ENST00000436141 242 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 NDUFA5P4-201ENST00000436704 385 ntBASIC6.11□□□□□ -1.43
USPL1Q5W0Q7 YWHAZP8-201ENST00000436935 731 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms