Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC004853.1-201ENST00000604902 698 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AL365503.1-201ENST00000605247 905 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC127502.3-201ENST00000636170 1206 ntBASIC4.43□□□□□ -1.7
CCDC38Q502W7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC38Q502W7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC38Q502W7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 MAPK10-373ENST00000641983 6772 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC079741.1-201ENST00000321498 212 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 MIR3065-201ENST00000390137 79 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AL031577.2-201ENST00000404133 280 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 RPS16P5-201ENST00000406501 404 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 MIR1183-201ENST00000408856 89 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 RNA5SP306-201ENST00000411087 107 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC092447.6-201ENST00000414578 210 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC245028.1-201ENST00000423259 256 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 MTND4LP10-201ENST00000435146 291 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 RPL35AP15-201ENST00000468042 339 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC106872.3-201ENST00000495104 446 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 POU5F1P7-201ENST00000508759 541 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 IGHV3-32-201ENST00000519182 355 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AP000827.1-201ENST00000527814 258 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC007424.1-203ENST00000554613 687 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC012435.1-202ENST00000568772 240 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 AC121247.2-201ENST00000604776 136 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 AP005019.3-201ENST00000620418 560 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 MIR3974-201ENST00000637126 96 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 CRYM-AS1-204ENST00000637983 556 ntBASIC4.42□□□□□ -1.7
CCDC38Q502W7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC38Q502W7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC38Q502W7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC38Q502W7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC38Q502W7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC38Q502W7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 RNU6-660P-201ENST00000364566 109 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC38Q502W7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 Y_RNA.560-201ENST00000384689 102 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC097374.1-203ENST00000400783 485 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 RPS4XP9-201ENST00000405151 780 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 RNU6-712P-201ENST00000410558 100 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 HMGB1P11-201ENST00000413899 637 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 TMSB10P2-201ENST00000416049 131 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 LSM1P1-201ENST00000438629 273 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AL513533.1-201ENST00000453728 415 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 RPS29P33-201ENST00000456717 146 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 snoU13.8-201ENST00000458890 104 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 RPS3AP43-201ENST00000479743 781 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC111000.3-201ENST00000508057 576 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 AC108043.1-201ENST00000512696 574 ntBASIC4.41□□□□□ -1.7
CCDC38Q502W7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms