Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 HSPE1P28-201ENST00000443139 211 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCB1Q12824 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 RPS3AP14-201ENST00000483907 780 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC068724.1-201ENST00000487100 792 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC110792.2-201ENST00000510278 224 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 RN7SKP234-201ENST00000517173 224 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC113192.3-201ENST00000529152 742 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 OSBPL9P3-201ENST00000534523 595 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 POLR2KP1-201ENST00000553226 168 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC005951.1-201ENST00000576706 485 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 BNIP3P19-201ENST00000605397 577 ntBASIC3.3□□□□□ -1.88
SMARCB1Q12824 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SMARCB1Q12824 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AL157700.1-201ENST00000561973 1432 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 RNU6-481P-201ENST00000384194 107 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 SNORA70E-201ENST00000384492 135 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AL121882.1-201ENST00000422893 417 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC006994.1-201ENST00000438212 839 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC016696.1-201ENST00000446949 318 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 NANOGNBP1-201ENST00000448444 480 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC012181.1-201ENST00000479895 423 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 RPS4XP13-201ENST00000483219 789 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AP003049.1-201ENST00000529418 457 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC112503.1-201ENST00000608436 391 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC121761.2-201ENST00000617300 689 ntBASIC3.29□□□□□ -1.88
SMARCB1Q12824 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCB1Q12824 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCB1Q12824 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SMARCB1Q12824 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 MIR634-201ENST00000385208 97 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCB1Q12824 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AL662791.1-201ENST00000441992 928 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC146507.1-201ENST00000468335 354 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC078857.1-201ENST00000469870 667 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 RPL31P13-201ENST00000484151 370 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC090071.1-201ENST00000507713 644 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC008494.2-201ENST00000514544 370 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC027338.1-201ENST00000514840 825 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 RNU4-60P-201ENST00000517239 135 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 RN7SKP289-201ENST00000517244 295 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AP000916.1-201ENST00000533869 835 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC139103.1-201ENST00000534696 1030 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC010928.3-201ENST00000587712 541 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 PCNAP1-202ENST00000595299 752 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCB1Q12824 PRELID3BP8-201ENST00000604148 295 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 RPL21P136-201ENST00000605378 396 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC113194.1-201ENST00000606037 500 ntBASIC3.28□□□□□ -1.88
SMARCB1Q12824 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms