Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MTCO3P40-201ENST00000392516 676 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 MIR921-201ENST00000401133 56 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL133270.1-201ENST00000402635 279 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 RN7SKP106-201ENST00000410832 272 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 CYCSP10-201ENST00000417973 294 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 TIMM9P3-201ENST00000428659 274 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 OR51AB1P-201ENST00000429046 620 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 USP9YP9-201ENST00000429406 715 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 MTND1P2-201ENST00000430604 821 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AL049745.1-201ENST00000433953 286 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC108734.1-201ENST00000439549 399 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.34□□□□□ -1.55
SSRP1Q08945 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 Z99127.3-201ENST00000448158 395 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC146507.1-201ENST00000468335 354 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL121769.1-201ENST00000469473 401 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.34□□□□□ -1.55
SSRP1Q08945 PTGES3P3-201ENST00000511479 482 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC010493.1-201ENST00000513479 292 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC005798.1-201ENST00000513715 387 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 RNU6-513P-201ENST00000516104 104 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 PTP4A1P6-201ENST00000531034 478 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC123904.2-201ENST00000548059 300 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 MIR4270-201ENST00000581799 70 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 ELOCP28-201ENST00000590044 317 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC067852.4-201ENST00000590314 478 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.34□□□□□ -1.55
SSRP1Q08945 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 BX664608.1-201ENST00000610519 487 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.34□□□□□ -1.55
SSRP1Q08945 AL359880.1-201ENST00000621879 266 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SSRP1Q08945 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
SSRP1Q08945 AC017104.4-201ENST00000636283 1592 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSRP1Q08945 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC008033.1-201ENST00000216407 1162 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSRP1Q08945 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSRP1Q08945 RNA5SP443-201ENST00000363083 132 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 SNORD115-47-201ENST00000391226 86 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.33□□□□□ -1.56
SSRP1Q08945 RNU4-55P-201ENST00000410731 137 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.33□□□□□ -1.56
SSRP1Q08945 FABP3P2-201ENST00000453169 399 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AL359385.1-201ENST00000456509 365 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AC013267.1-201ENST00000458227 267 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 RPL37P6-202ENST00000464216 403 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 RPS4XP10-201ENST00000465034 731 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 RPL12P20-201ENST00000475538 479 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 RPL23AP72-201ENST00000492447 435 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 MTCO3P44-201ENST00000510977 541 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 NPM1P41-201ENST00000512920 831 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.33□□□□□ -1.56
SSRP1Q08945 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.33□□□□□ -1.56
SSRP1Q08945 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSRP1Q08945 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC121334.2-201ENST00000605387 271 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.33□□□□□ -1.56
SSRP1Q08945 AC092954.2-201ENST00000609103 430 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AL355073.2-201ENST00000612106 557 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AC007014.2-201ENST00000615581 479 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 U6.42-201ENST00000618440 107 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 AL732618.1-201ENST00000623251 301 ntBASIC5.33□□□□□ -1.56
SSRP1Q08945 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.33□□□□□ -1.56
SSRP1Q08945 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms