Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC007566.2-201ENST00000603642 413 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 HMGN2P28-201ENST00000606102 262 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AL583856.2-201ENST00000606298 543 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AC093673.2-201ENST00000609674 331 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 AL392048.1-201ENST00000613946 534 ntBASIC4.45□□□□□ -1.7
CALD1Q05682 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CALD1Q05682 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CALD1Q05682 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.45□□□□□ -1.7
CALD1Q05682 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.44□□□□□ -1.7
CALD1Q05682 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 RNU6-582P-201ENST00000362989 107 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 RNU6-298P-201ENST00000390888 96 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 SSXP10-201ENST00000402595 565 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC005517.2-201ENST00000424673 553 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.44□□□□□ -1.7
CALD1Q05682 YME1L1P1-201ENST00000429435 297 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC008264.1-201ENST00000447612 367 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 PRDX3P3-201ENST00000447765 522 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 RPL26P28-201ENST00000451325 435 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC097262.1-201ENST00000452559 548 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 HMGN3P1-201ENST00000453847 193 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 RPL6P9-201ENST00000466502 859 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC093663.1-201ENST00000497190 394 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 WBP1LP4-201ENST00000505043 344 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.44□□□□□ -1.7
CALD1Q05682 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.44□□□□□ -1.7
CALD1Q05682 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.44□□□□□ -1.7
CALD1Q05682 RNU4-60P-201ENST00000517239 135 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC107934.2-201ENST00000518653 310 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 NDUFS5P6-201ENST00000529136 295 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AL139174.1-201ENST00000531489 886 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 ZNF192P1-203ENST00000565888 810 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.44□□□□□ -1.7
CALD1Q05682 AC074051.3-201ENST00000570238 358 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC053481.3-201ENST00000577881 843 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.44□□□□□ -1.7
CALD1Q05682 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.44□□□□□ -1.7
CALD1Q05682 OR4G1P-201ENST00000588632 938 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC018754.1-201ENST00000607486 925 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 AC084757.4-201ENST00000616350 526 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 MIR7975-201ENST00000619350 68 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AC004808.1-201ENST00000627671 721 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 AL021368.2-201ENST00000606125 5352 ntBASIC4.44□□□□□ -1.7
CALD1Q05682 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CALD1Q05682 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CALD1Q05682 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CALD1Q05682 RNU6-839P-201ENST00000363347 108 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RNA5SP72-201ENST00000364442 117 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CALD1Q05682 SNORD116-23-201ENST00000384645 92 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 MIR490-201ENST00000384865 128 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 Z99755.1-201ENST00000414048 380 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RPS7P9-201ENST00000414704 586 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 USP9YP21-201ENST00000420603 432 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.43□□□□□ -1.7
CALD1Q05682 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.43□□□□□ -1.7
CALD1Q05682 AC096632.1-201ENST00000427395 310 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.43□□□□□ -1.7
CALD1Q05682 SETP5-201ENST00000437270 562 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 PTGES3P1-201ENST00000439531 483 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RPS4XP2-201ENST00000458402 793 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC146507.1-201ENST00000468335 354 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC020893.1-201ENST00000502452 580 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC010265.1-201ENST00000513509 211 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RNA5SP135-201ENST00000517019 125 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.43□□□□□ -1.7
CALD1Q05682 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.43□□□□□ -1.7
CALD1Q05682 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.43□□□□□ -1.7
CALD1Q05682 NCAPGP2-201ENST00000557911 754 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.43□□□□□ -1.7
CALD1Q05682 MIR4666A-201ENST00000580160 79 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RN7SL339P-201ENST00000580597 296 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.43□□□□□ -1.7
CALD1Q05682 AC067852.3-201ENST00000589177 561 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.43□□□□□ -1.7
CALD1Q05682 AL009028.1-201ENST00000604895 802 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RNA5SP108-201ENST00000605921 117 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AF129408.1-201ENST00000608767 431 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.43□□□□□ -1.7
CALD1Q05682 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.43□□□□□ -1.7
CALD1Q05682 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.43□□□□□ -1.7
CALD1Q05682 AC099654.8-201ENST00000637757 681 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 AC058791.1-201ENST00000608412 3198 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CALD1Q05682 AC021755.1-201ENST00000559747 1447 ntBASIC4.43□□□□□ -1.7
CALD1Q05682 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.43□□□□□ -1.7
CALD1Q05682 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CALD1Q05682 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CALD1Q05682 GABPAP-201ENST00000419271 1356 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms