Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AL591503.2-201ENST00000442314 1005 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 MTCYBP3-201ENST00000445588 1137 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 ARPC3P5-201ENST00000448802 534 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE3AQ05086 OR9M1P-201ENST00000459641 921 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AC010469.1-201ENST00000463864 576 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AC090013.1-201ENST00000485147 480 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
UBE3AQ05086 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 STMN1P2-201ENST00000508435 439 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
UBE3AQ05086 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC022861.1-201ENST00000522981 663 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC091516.1-201ENST00000549191 703 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE3AQ05086 ISCA1P3-201ENST00000577104 373 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE3AQ05086 AC106791.2-201ENST00000604680 391 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AL133507.1-201ENST00000605269 557 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 HMGN2P28-201ENST00000606102 262 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.35□□□□□ -1.71
UBE3AQ05086 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE3AQ05086 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.35□□□□□ -1.71
UBE3AQ05086 MTND2P41-201ENST00000637599 773 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 AL356473.1-201ENST00000406203 1408 ntBASIC4.35□□□□□ -1.71
UBE3AQ05086 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.35□□□□□ -1.71
UBE3AQ05086 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UBE3AQ05086 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UBE3AQ05086 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBE3AQ05086 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AL391994.1-201ENST00000254724 282 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 RNA5SP502-201ENST00000362694 119 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 RNA5SP124-201ENST00000362739 110 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 RNU6-989P-201ENST00000362756 107 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 RNA5SP22-201ENST00000365393 109 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 RNU6-821P-201ENST00000390995 107 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AL356131.1-201ENST00000405826 414 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AL035407.1-201ENST00000429211 571 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 TXNL1P1-201ENST00000429528 554 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 ZYG11AP1-201ENST00000430329 837 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.34□□□□□ -1.71
UBE3AQ05086 RPS4XP4-201ENST00000443195 763 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AL606662.1-201ENST00000445763 553 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AC005297.2-201ENST00000450430 606 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 ABCF2P2-201ENST00000450549 296 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE3AQ05086 RNU7-136P-201ENST00000458819 69 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 MEMO1P3-201ENST00000459811 302 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.34□□□□□ -1.71
UBE3AQ05086 SYPL1P1-201ENST00000473622 768 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 S100A11P1-201ENST00000477525 312 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE3AQ05086 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.34□□□□□ -1.71
UBE3AQ05086 RPL29P14-201ENST00000495837 428 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AC006499.6-201ENST00000511169 607 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 MTND2P38-201ENST00000522536 667 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UBE3AQ05086 PHBP17-201ENST00000528576 541 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.34□□□□□ -1.71
UBE3AQ05086 AL596327.1-201ENST00000603629 213 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AC018638.7-201ENST00000605836 1114 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 MIR6868-201ENST00000611215 58 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 Z99129.2-201ENST00000619967 314 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AC040168.1-201ENST00000623594 991 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.34□□□□□ -1.71
UBE3AQ05086 DDX43P2-201ENST00000604753 1354 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.34□□□□□ -1.71
UBE3AQ05086 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
UBE3AQ05086 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
UBE3AQ05086 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
UBE3AQ05086 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.33□□□□□ -1.72
UBE3AQ05086 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
UBE3AQ05086 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.33□□□□□ -1.72
UBE3AQ05086 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
UBE3AQ05086 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.33□□□□□ -1.72
UBE3AQ05086 RPL23AP57-201ENST00000332361 466 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBE3AQ05086 SNORA73.2-201ENST00000364946 201 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBE3AQ05086 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBE3AQ05086 RNU6-837P-201ENST00000391056 108 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 U3.29-201ENST00000391296 212 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 AL031679.1-201ENST00000400616 525 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 RNU2-15P-201ENST00000410692 191 ntBASIC4.33□□□□□ -1.72
UBE3AQ05086 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms