Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC055876.5-201ENST00000605667 259 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AL583856.2-201ENST00000606298 543 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 MIR6748-201ENST00000610433 71 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AC080188.3-201ENST00000624842 748 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AP000720.1-201ENST00000625091 483 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AC087821.2-201ENST00000637086 450 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
UBXN1Q04323 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
UBXN1Q04323 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
UBXN1Q04323 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
UBXN1Q04323 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 SUGT1P1-201ENST00000379514 476 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AC007066.1-201ENST00000392902 381 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC016769.3-201ENST00000396562 315 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 RNU4-65P-201ENST00000410473 140 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 BTF3P8-201ENST00000414577 526 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.8□□□□□ -1.8
UBXN1Q04323 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.8□□□□□ -1.8
UBXN1Q04323 DUTP6-201ENST00000425573 462 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 RPL7P2-201ENST00000427639 268 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.8□□□□□ -1.8
UBXN1Q04323 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AC006539.3-201ENST00000454258 129 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 snoU109.4-201ENST00000458953 143 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC012181.1-201ENST00000479895 423 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC013828.1-201ENST00000481845 158 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AC105914.1-201ENST00000511798 226 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 RNU6-27P-201ENST00000516146 107 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.8□□□□□ -1.8
UBXN1Q04323 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AP001636.2-201ENST00000525517 696 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 PDCL2P2-201ENST00000533651 189 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC090502.2-201ENST00000549267 280 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.8□□□□□ -1.8
UBXN1Q04323 AC126365.2-201ENST00000580630 379 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC008507.2-201ENST00000588402 1176 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AL451086.1-201ENST00000605596 223 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC091946.2-201ENST00000606105 291 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AL592148.2-201ENST00000612210 372 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC231759.1-201ENST00000616455 597 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 AC006249.1-201ENST00000621223 471 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.8□□□□□ -1.8
UBXN1Q04323 CYP3A51P-201ENST00000633513 256 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UBXN1Q04323 MTCO1P23-201ENST00000415223 1526 ntBASIC3.8□□□□□ -1.8
UBXN1Q04323 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBXN1Q04323 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBXN1Q04323 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBXN1Q04323 SNORA70.2-201ENST00000364506 135 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBXN1Q04323 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 YPEL5P1-201ENST00000419731 367 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
UBXN1Q04323 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.79□□□□□ -1.8
UBXN1Q04323 HMGN2P20-201ENST00000437531 273 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 AL445669.2-201ENST00000454425 421 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 FABP5P12-201ENST00000515543 389 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 AC107934.2-201ENST00000518653 310 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AP000619.3-201ENST00000535634 1127 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC018630.1-201ENST00000541376 925 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC010198.2-201ENST00000550612 259 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.79□□□□□ -1.8
UBXN1Q04323 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.79□□□□□ -1.8
UBXN1Q04323 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 AC010738.1-201ENST00000604970 987 ntBASIC3.79□□□□□ -1.8
UBXN1Q04323 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBXN1Q04323 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBXN1Q04323 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
UBXN1Q04323 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBXN1Q04323 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.79□□□□□ -1.8
UBXN1Q04323 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
UBXN1Q04323 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBXN1Q04323 MFSD8-233ENST00000641482 4860 ntBASIC3.78□□□□□ -1.8
UBXN1Q04323 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBXN1Q04323 RPL7P26-201ENST00000333817 754 ntBASIC3.78□□□□□ -1.8
UBXN1Q04323 RNU6-1074P-201ENST00000383995 104 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms