Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 Y_RNA.9-201ENST00000362354 101 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 Y_RNA.70-201ENST00000362886 110 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 SNORA72.1-201ENST00000363485 129 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 RNU6-444P-201ENST00000383988 108 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL645927.1-201ENST00000396783 406 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 FGF7P8-201ENST00000402994 292 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 PRRC2CP1-201ENST00000404428 159 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL590002.1-201ENST00000406554 418 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 Y_RNA.608-201ENST00000410647 95 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 MTATP6P27-201ENST00000416987 621 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC008280.1-201ENST00000418851 412 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC069157.1-201ENST00000421749 137 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 YWHAZP8-201ENST00000436935 731 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC073614.1-201ENST00000438690 650 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 IGHV5-78-201ENST00000450948 295 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 OR6K1P-201ENST00000456766 971 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 RNU7-136P-201ENST00000458819 69 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 RN7SL222P-201ENST00000476452 299 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC017015.1-201ENST00000477387 286 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC041039.1-201ENST00000485656 536 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC019235.1-201ENST00000503847 207 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC098799.2-201ENST00000509466 868 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC117522.1-201ENST00000509821 380 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC015795.1-201ENST00000513669 327 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 RNU6-488P-201ENST00000515918 99 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC090151.1-201ENST00000520784 730 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AP000676.2-201ENST00000529711 301 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AK6P1-201ENST00000540219 478 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 FKBP1BP1-201ENST00000553366 325 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 EIF5A2P1-201ENST00000564027 460 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CYP4A43P-201ENST00000568156 121 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 TVP23CP2-201ENST00000571473 623 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC104785.1-201ENST00000603220 588 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL359880.1-201ENST00000621879 266 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC068880.5-201ENST00000624331 290 ntBASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ERVFC1-1P60608 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 AC011493.1-201ENST00000596753 1632 ntBASIC3.59□□□□□ -1.83
ERVFC1-1P60608 MARK2P15-201ENST00000432204 2186 ntBASIC3.59□□□□□ -1.83
ERVFC1-1P60608 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
ERVFC1-1P60608 RN7SKP44-201ENST00000363602 316 ntBASIC3.59□□□□□ -1.83
ERVFC1-1P60608 RNU6-289P-201ENST00000364093 107 ntBASIC3.59□□□□□ -1.83
ERVFC1-1P60608 Y_RNA.296-201ENST00000364930 108 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms