Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.07□□□□□ -1.92
VSX2P58304 AL020997.3-201ENST00000602843 359 ntBASIC3.07□□□□□ -1.92
VSX2P58304 BNIP3P19-201ENST00000605397 577 ntBASIC3.07□□□□□ -1.92
VSX2P58304 YPEL5P2-201ENST00000605553 359 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC245100.7-201ENST00000609678 442 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC006213.5-201ENST00000619673 288 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC097460.3-201ENST00000623099 442 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC092608.3-201ENST00000625017 386 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.07□□□□□ -1.92
VSX2P58304 AC008432.1-201ENST00000615912 1320 ntBASIC3.07□□□□□ -1.92
VSX2P58304 AL157700.1-201ENST00000561973 1432 ntBASIC3.07□□□□□ -1.92
VSX2P58304 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
VSX2P58304 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
VSX2P58304 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
VSX2P58304 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VSX2P58304 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 ATP5F1P6-201ENST00000402768 767 ntBASIC3.06□□□□□ -1.92
VSX2P58304 RNU4-47P-201ENST00000410876 114 ntBASIC3.06□□□□□ -1.92
VSX2P58304 RNU6-272P-201ENST00000411028 104 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 AC245291.1-201ENST00000419501 328 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AC005517.2-201ENST00000424673 553 ntBASIC3.06□□□□□ -1.92
VSX2P58304 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.06□□□□□ -1.92
VSX2P58304 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 AL662791.1-201ENST00000441992 928 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.06□□□□□ -1.92
VSX2P58304 Z99127.3-201ENST00000448158 395 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.06□□□□□ -1.92
VSX2P58304 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.06□□□□□ -1.92
VSX2P58304 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
VSX2P58304 RPL5P24-201ENST00000463742 885 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AC092185.1-201ENST00000491371 97 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.06□□□□□ -1.92
VSX2P58304 AC093755.1-201ENST00000512950 1023 ntBASIC3.06□□□□□ -1.92
VSX2P58304 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
VSX2P58304 IGKV2D-36-201ENST00000518643 226 ntBASIC3.06□□□□□ -1.92
VSX2P58304 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
VSX2P58304 OR4T1P-201ENST00000554933 911 ntBASIC3.06□□□□□ -1.92
VSX2P58304 SERPINE4P-201ENST00000554978 281 ntBASIC3.06□□□□□ -1.92
VSX2P58304 GTF2IP8-201ENST00000560687 584 ntBASIC3.06□□□□□ -1.92
VSX2P58304 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.06□□□□□ -1.92
VSX2P58304 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.06□□□□□ -1.92
VSX2P58304 MIR4504-201ENST00000577413 92 ntBASIC3.06□□□□□ -1.92
VSX2P58304 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AC010928.3-201ENST00000587712 541 ntBASIC3.06□□□□□ -1.92
VSX2P58304 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.06□□□□□ -1.92
VSX2P58304 BNIP3P4-201ENST00000604946 565 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.06□□□□□ -1.92
VSX2P58304 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.06□□□□□ -1.92
VSX2P58304 AL109659.3-201ENST00000624985 950 ntBASIC3.06□□□□□ -1.92
VSX2P58304 MIR4496-201ENST00000635896 61 ntBASIC3.06□□□□□ -1.92
VSX2P58304 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
VSX2P58304 AC107081.3-201ENST00000612715 2034 ntBASIC3.05□□□□□ -1.92
VSX2P58304 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
VSX2P58304 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
VSX2P58304 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
VSX2P58304 RNU6-356P-201ENST00000384140 107 ntBASIC3.05□□□□□ -1.92
VSX2P58304 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VSX2P58304 AL355379.1-201ENST00000405542 640 ntBASIC3.05□□□□□ -1.92
VSX2P58304 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
VSX2P58304 AC073264.1-201ENST00000411508 416 ntBASIC3.05□□□□□ -1.92
VSX2P58304 Z92545.1-201ENST00000411782 234 ntBASIC3.05□□□□□ -1.92
VSX2P58304 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
VSX2P58304 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 AC093422.3-201ENST00000428506 305 ntBASIC3.05□□□□□ -1.92
VSX2P58304 AL512649.1-201ENST00000428997 581 ntBASIC3.05□□□□□ -1.92
VSX2P58304 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.05□□□□□ -1.92
VSX2P58304 RPL29P29-201ENST00000448725 423 ntBASIC3.05□□□□□ -1.92
VSX2P58304 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.05□□□□□ -1.92
VSX2P58304 PRDX3P4-201ENST00000470828 747 ntBASIC3.05□□□□□ -1.92
VSX2P58304 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 AC104108.1-201ENST00000509930 412 ntBASIC3.05□□□□□ -1.92
VSX2P58304 RNU6-416P-201ENST00000516265 103 ntBASIC3.05□□□□□ -1.92
VSX2P58304 OR8K2P-201ENST00000524645 927 ntBASIC3.05□□□□□ -1.92
VSX2P58304 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 AC074029.1-201ENST00000552531 1044 ntBASIC3.05□□□□□ -1.92
VSX2P58304 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.05□□□□□ -1.92
VSX2P58304 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.05□□□□□ -1.92
VSX2P58304 AC005000.2-201ENST00000605468 310 ntBASIC3.05□□□□□ -1.92
VSX2P58304 HSPE1P14-201ENST00000605812 302 ntBASIC3.05□□□□□ -1.92
VSX2P58304 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VSX2P58304 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.05□□□□□ -1.92
VSX2P58304 AC112503.1-201ENST00000608436 391 ntBASIC3.05□□□□□ -1.92
VSX2P58304 uc_338.25-201ENST00000613756 156 ntBASIC3.05□□□□□ -1.92
VSX2P58304 AC026422.1-201ENST00000623961 452 ntBASIC3.05□□□□□ -1.92
VSX2P58304 AC091903.1-201ENST00000624322 454 ntBASIC3.05□□□□□ -1.92
VSX2P58304 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms