Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 NBR2-204ENST00000587322 63 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN20P56880 AF131215.7-201ENST00000602443 707 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 MTCYBP22-201ENST00000603788 447 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 AC006927.3-201ENST00000638789 384 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 DHFRP6-201ENST00000401776 268 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 RBMY1KP-201ENST00000423480 476 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC004975.1-201ENST00000428733 208 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 MED14P1-201ENST00000430517 648 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC129850.1-201ENST00000436203 508 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC009961.3-201ENST00000449832 765 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 FAM172BP-201ENST00000487497 1089 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 RPS27AP13-201ENST00000498403 237 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC108043.1-201ENST00000512696 574 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN20P56880 MTCO3P28-201ENST00000513351 515 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 HIGD1AP3-201ENST00000515857 278 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN20P56880 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC135279.1-201ENST00000543493 504 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN20P56880 AP005136.1-201ENST00000579765 429 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 RN7SL600P-201ENST00000581811 299 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN20P56880 AL031985.2-201ENST00000600955 480 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC025588.3-201ENST00000604182 274 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AL591034.3-201ENST00000605511 685 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC106028.5-201ENST00000610332 395 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC023043.4-201ENST00000612081 449 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 AC090116.1-201ENST00000615679 446 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AL356596.1-201ENST00000624230 379 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 ZNF734P-201ENST00000419494 1534 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
CLDN20P56880 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN20P56880 AL356473.1-201ENST00000406203 1408 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 AC021755.1-201ENST00000559747 1447 ntBASIC3.78□□□□□ -1.8
CLDN20P56880 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLDN20P56880 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLDN20P56880 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN20P56880 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 BDP1P-201ENST00000582658 1990 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 SNORD82-201ENST00000365530 70 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 RNU6-730P-201ENST00000383954 104 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 RPS26P8-201ENST00000393490 348 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 MIR1179-201ENST00000408703 91 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN20P56880 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 TPMTP2-201ENST00000414372 726 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 HSFY4P-201ENST00000415994 1181 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 OFD1P18Y-201ENST00000420889 959 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 MTND1P30-201ENST00000441241 901 ntBASIC3.77□□□□□ -1.81
CLDN20P56880 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN20P56880 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN20P56880 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN20P56880 NUTF2P7-201ENST00000453086 375 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms