Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA1P56159 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 AC244517.1-201ENST00000606030 2086 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AL078621.3-201ENST00000623707 2042 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 AC100757.1-201ENST00000616872 1835 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC114774.1-201ENST00000507410 1770 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 Z95114.1-201ENST00000624264 14574 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA1P56159 RN7SKP185-201ENST00000362813 326 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 RNU5E-6P-201ENST00000365574 115 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 MIR223-201ENST00000385204 110 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 RNU4-65P-201ENST00000410473 140 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.84□□□□□ -1.63
GFRA1P56159 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC092447.6-201ENST00000414578 210 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA1P56159 NDUFB4P8-201ENST00000435351 367 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AL513533.1-201ENST00000453728 415 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 RPL23AP11-201ENST00000475260 469 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC072052.1-201ENST00000496556 306 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 MTCO3P9-201ENST00000506989 781 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 SCARNA20.4-201ENST00000516969 131 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC136777.2-201ENST00000522979 358 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.84□□□□□ -1.63
GFRA1P56159 AP005435.4-201ENST00000529514 284 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.84□□□□□ -1.63
GFRA1P56159 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA1P56159 AL355375.2-201ENST00000574825 175 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC069307.1-201ENST00000602820 447 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AL050343.2-201ENST00000607338 280 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 SDR42E1P1-201ENST00000611327 477 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 AC037198.3-201ENST00000616754 526 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 OR9K1P-202ENST00000641111 3217 ntBASIC4.84□□□□□ -1.63
GFRA1P56159 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.84□□□□□ -1.63
GFRA1P56159 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
GFRA1P56159 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA1P56159 FAM91A3P-201ENST00000456826 2544 ntBASIC4.84□□□□□ -1.64
GFRA1P56159 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
GFRA1P56159 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GFRA1P56159 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.84□□□□□ -1.64
GFRA1P56159 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
GFRA1P56159 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.84□□□□□ -1.64
GFRA1P56159 AC005005.4-201ENST00000623789 16698 ntBASIC4.84□□□□□ -1.64
GFRA1P56159 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GFRA1P56159 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 TAB3P1-202ENST00000452645 1634 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 MTND4P14-201ENST00000435799 1354 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 AC108751.5-201ENST00000492880 1336 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.83□□□□□ -1.64
GFRA1P56159 RNU6-263P-201ENST00000363811 107 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 RNU4-20P-201ENST00000365601 151 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 PPIAP9-201ENST00000403866 498 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AL359643.1-201ENST00000404109 423 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 MIR1302-11-201ENST00000408051 138 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 MIR1302-9-201ENST00000408365 138 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 MIR1302-10-201ENST00000408734 138 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 Y_RNA.615-201ENST00000410769 117 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC068533.1-201ENST00000418542 415 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AL137014.1-201ENST00000420490 1226 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AL645937.1-202ENST00000421799 937 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AL139148.1-201ENST00000427122 680 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.83□□□□□ -1.64
GFRA1P56159 RPL23AP43-201ENST00000446445 471 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.83□□□□□ -1.64
GFRA1P56159 RPL29P29-201ENST00000448725 423 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AL121877.1-201ENST00000453704 622 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC007967.1-201ENST00000455422 1159 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC079804.1-201ENST00000461922 436 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC006967.1-201ENST00000467608 589 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 RPS27AP1-201ENST00000475545 471 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 RPS15AP36-201ENST00000492022 382 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC092436.1-201ENST00000506450 503 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.83□□□□□ -1.64
GFRA1P56159 RNU4-49P-201ENST00000516080 140 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 RNA5SP92-201ENST00000516437 110 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 RNA5SP373-201ENST00000517271 95 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms