Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MIR4284-201ENST00000578924 81 ntBASIC3.78□□□□□ -1.8
CDH13P55290 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH13P55290 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 VN1R78P-201ENST00000597393 564 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC087683.2-201ENST00000611384 326 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AL450489.1-201ENST00000612071 468 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC004009.2-201ENST00000623016 728 ntBASIC3.78□□□□□ -1.8
CDH13P55290 AC073530.2-201ENST00000623987 261 ntBASIC3.78□□□□□ -1.8
CDH13P55290 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH13P55290 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CDH13P55290 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CDH13P55290 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
CDH13P55290 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDH13P55290 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
CDH13P55290 SNORD51-201ENST00000384320 80 ntBASIC3.77□□□□□ -1.81
CDH13P55290 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDH13P55290 RSL24D1P4-201ENST00000400938 484 ntBASIC3.77□□□□□ -1.81
CDH13P55290 RNU4-78P-201ENST00000410940 126 ntBASIC3.77□□□□□ -1.81
CDH13P55290 USP9YP33-201ENST00000412220 421 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AL513174.1-201ENST00000423182 629 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 PSMA6P3-201ENST00000428242 164 ntBASIC3.77□□□□□ -1.81
CDH13P55290 USP9YP35-201ENST00000435696 412 ntBASIC3.77□□□□□ -1.81
CDH13P55290 YWHAZP7-201ENST00000436906 631 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 H2AFZP6-201ENST00000444403 394 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 NDUFA5P2-201ENST00000519723 344 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 LRRC34P1-201ENST00000542742 915 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC091515.1-201ENST00000548110 679 ntBASIC3.77□□□□□ -1.81
CDH13P55290 CBX3P5-201ENST00000552017 521 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH13P55290 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 MIR5186-201ENST00000577504 120 ntBASIC3.77□□□□□ -1.81
CDH13P55290 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 SNRPGP15-201ENST00000600149 222 ntBASIC3.77□□□□□ -1.81
CDH13P55290 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 MLECP1-201ENST00000615893 709 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC009159.2-201ENST00000617603 606 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AC040168.1-201ENST00000623594 991 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC091905.1-201ENST00000624400 311 ntBASIC3.77□□□□□ -1.81
CDH13P55290 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH13P55290 AC138649.5-201ENST00000637456 137 ntBASIC3.77□□□□□ -1.81
CDH13P55290 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH13P55290 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH13P55290 RLIMP1-201ENST00000339626 1680 ntBASIC3.77□□□□□ -1.81
CDH13P55290 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH13P55290 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH13P55290 RPS4XP5-202ENST00000449995 1334 ntBASIC3.76□□□□□ -1.81
CDH13P55290 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH13P55290 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH13P55290 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH13P55290 RPL23AP57-201ENST00000332361 466 ntBASIC3.76□□□□□ -1.81
CDH13P55290 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDH13P55290 RNA5SP258-201ENST00000362750 119 ntBASIC3.76□□□□□ -1.81
CDH13P55290 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
CDH13P55290 RNA5SP443-201ENST00000363083 132 ntBASIC3.76□□□□□ -1.81
CDH13P55290 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH13P55290 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDH13P55290 MTND4P13-201ENST00000402078 1023 ntBASIC3.76□□□□□ -1.81
CDH13P55290 HSPE1P8-201ENST00000406997 288 ntBASIC3.76□□□□□ -1.81
CDH13P55290 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH13P55290 RNU2-15P-201ENST00000410692 191 ntBASIC3.76□□□□□ -1.81
CDH13P55290 TPMTP2-201ENST00000414372 726 ntBASIC3.76□□□□□ -1.81
CDH13P55290 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.76□□□□□ -1.81
CDH13P55290 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.76□□□□□ -1.81
CDH13P55290 MTCO2P5-201ENST00000422621 426 ntBASIC3.76□□□□□ -1.81
CDH13P55290 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH13P55290 HSPE1P28-201ENST00000443139 211 ntBASIC3.76□□□□□ -1.81
CDH13P55290 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH13P55290 RPS20P32-201ENST00000456044 356 ntBASIC3.76□□□□□ -1.81
CDH13P55290 HMGB1P25-201ENST00000468402 607 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms