Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGCS2P54868 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS2P54868 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCS2P54868 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.65□□□□□ -1.82
HMGCS2P54868 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGCS2P54868 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGCS2P54868 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGCS2P54868 SNORA71.1-201ENST00000364523 117 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 AL603865.2-201ENST00000401679 213 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 ZNF603P-201ENST00000405613 487 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 MIR1303-201ENST00000408625 86 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 RN7SKP220-201ENST00000410611 288 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 VN1R51P-201ENST00000411675 945 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 SETP5-201ENST00000437270 562 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AL645638.1-201ENST00000440519 361 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 RPL12P26-201ENST00000452430 487 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 PRDX3P4-201ENST00000470828 747 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC026414.1-201ENST00000504046 698 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGCS2P54868 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 SNORA19.3-201ENST00000516165 130 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 MIR2276-201ENST00000516886 89 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC007424.1-203ENST00000554613 687 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC095057.3-201ENST00000567102 1157 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AL022067.1-201ENST00000602426 454 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 AC025946.2-201ENST00000603398 234 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC006023.1-201ENST00000603944 259 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 RNU6-1192P-201ENST00000612197 107 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 RNU6-489P-201ENST00000618289 107 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC110801.1-201ENST00000623590 212 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 AC013437.2-201ENST00000639587 677 ntBASIC3.65□□□□□ -1.83
HMGCS2P54868 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
HMGCS2P54868 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGCS2P54868 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HMGCS2P54868 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 MCTS2P-201ENST00000394552 546 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 ARF4P3-201ENST00000397387 509 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 RNU2-6P-201ENST00000411404 190 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC092745.2-202ENST00000411880 369 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC004987.3-201ENST00000413879 771 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC246680.2-201ENST00000422106 389 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 CST9LP2-201ENST00000437612 320 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC004854.1-201ENST00000440356 349 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC016696.1-201ENST00000446949 318 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 SEPT14P24-201ENST00000447236 180 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AL050341.1-201ENST00000447743 313 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGCS2P54868 AC096992.1-201ENST00000459808 709 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC104164.3-201ENST00000467363 1258 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGCS2P54868 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGCS2P54868 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGCS2P54868 TPT1P8-201ENST00000510120 555 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AP001207.2-201ENST00000519490 539 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS2P54868 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 AC034105.3-201ENST00000565294 442 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGCS2P54868 MIR4672-201ENST00000583126 81 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGCS2P54868 AL391001.1-201ENST00000602747 715 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC013468.1-201ENST00000608680 598 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC093673.2-201ENST00000609674 331 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 AC078899.5-201ENST00000612475 178 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 MIR622-201ENST00000638396 96 ntBASIC3.64□□□□□ -1.83
HMGCS2P54868 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HMGCS2P54868 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGCS2P54868 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGCS2P54868 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS2P54868 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGCS2P54868 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGCS2P54868 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HMGCS2P54868 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGCS2P54868 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HMGCS2P54868 SNORD15B-201ENST00000384714 146 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms