Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 SNORD115-7-201ENST00000365306 82 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 HMGB3P7-201ENST00000400214 611 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RNU2-23P-201ENST00000410545 195 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC7.4□□□□□ -1.22
PRIM1P49642 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 USMG5P1-201ENST00000425964 177 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 SDAD1P3-201ENST00000427380 333 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RPL23AP69-201ENST00000431134 458 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 FTH1P1-201ENST00000437933 532 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AL121871.1-201ENST00000443413 436 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 CEACAMP7-201ENST00000444105 496 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AL031584.1-201ENST00000447169 754 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
PRIM1P49642 HMGB3P30-201ENST00000457863 606 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RPS3AP41-201ENST00000462701 778 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 MED28P2-201ENST00000475771 317 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RPS18P6-201ENST00000476880 458 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC7.4□□□□□ -1.22
PRIM1P49642 AC068781.1-201ENST00000488231 618 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 AC018797.3-201ENST00000513388 1241 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RNU6-1023P-201ENST00000516137 106 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 Y_RNA.700-201ENST00000516806 100 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 RNU6-182P-201ENST00000516970 105 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.4□□□□□ -1.22
PRIM1P49642 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.4□□□□□ -1.22
PRIM1P49642 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.4□□□□□ -1.22
PRIM1P49642 AL049539.1-201ENST00000611964 459 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 DLEU2_5.1-201ENST00000615567 84 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC7.4□□□□□ -1.22
PRIM1P49642 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PRIM1P49642 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PRIM1P49642 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
PRIM1P49642 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
PRIM1P49642 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.4□□□□□ -1.23
PRIM1P49642 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
PRIM1P49642 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
PRIM1P49642 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.39□□□□□ -1.23
PRIM1P49642 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 PWAR1-201ENST00000624188 2414 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 BDP1P-201ENST00000582658 1990 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 HSPA8P14-201ENST00000552265 1805 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 U3.2-201ENST00000362981 210 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 MIR1302-6-201ENST00000408466 90 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 AL139095.3-201ENST00000419672 1203 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.39□□□□□ -1.23
PRIM1P49642 AC092013.1-201ENST00000438795 332 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC7.39□□□□□ -1.23
PRIM1P49642 AC074255.1-201ENST00000511259 501 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 RN7SKP288-201ENST00000516227 268 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.39□□□□□ -1.23
PRIM1P49642 OR4P1P-201ENST00000530808 1136 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.39□□□□□ -1.23
PRIM1P49642 AC126915.2-201ENST00000610957 190 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.39□□□□□ -1.23
PRIM1P49642 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.39□□□□□ -1.23
PRIM1P49642 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 AC007938.2-201ENST00000604666 2634 ntBASIC7.39□□□□□ -1.23
PRIM1P49642 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
PRIM1P49642 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PRIM1P49642 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.39□□□□□ -1.23
PRIM1P49642 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PRIM1P49642 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PRIM1P49642 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
PRIM1P49642 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 AC103710.2-202ENST00000641454 2853 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.38□□□□□ -1.23
PRIM1P49642 AC011933.2-201ENST00000578539 2790 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.38□□□□□ -1.23
PRIM1P49642 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 SNORA20.1-201ENST00000364790 130 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 Y_RNA.478-201ENST00000384358 107 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 RNU1-106P-201ENST00000384382 164 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PRIM1P49642 AL136372.1-201ENST00000403060 228 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms