Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 KLHL2P1-201ENST00000508691 521 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AC021146.1-201ENST00000511202 716 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AC112673.1-201ENST00000513168 575 ntBASIC3.43□□□□□ -1.86
CDX1P47902 RN7SKP289-201ENST00000517244 295 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 AC023538.1-201ENST00000534576 736 ntBASIC3.43□□□□□ -1.86
CDX1P47902 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.43□□□□□ -1.86
CDX1P47902 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 AL596327.1-201ENST00000603629 213 ntBASIC3.43□□□□□ -1.86
CDX1P47902 DUXAP11-201ENST00000603858 526 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AC004853.1-201ENST00000604902 698 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.43□□□□□ -1.86
CDX1P47902 AC023043.4-201ENST00000612081 449 ntBASIC3.43□□□□□ -1.86
CDX1P47902 MLECP1-201ENST00000615893 709 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AC009159.2-201ENST00000617603 606 ntBASIC3.43□□□□□ -1.86
CDX1P47902 AL607023.1-201ENST00000620045 248 ntBASIC3.43□□□□□ -1.86
CDX1P47902 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDX1P47902 AC007490.1-201ENST00000624321 703 ntBASIC3.43□□□□□ -1.86
CDX1P47902 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 MIR6830-201ENST00000636015 70 ntBASIC3.43□□□□□ -1.86
CDX1P47902 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
CDX1P47902 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDX1P47902 ZNF542P-204ENST00000482727 1305 ntBASIC3.43□□□□□ -1.86
CDX1P47902 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.43□□□□□ -1.86
CDX1P47902 MAPK10-373ENST00000641983 6772 ntBASIC3.43□□□□□ -1.86
CDX1P47902 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 SNORD113-6-201ENST00000363345 75 ntBASIC3.42□□□□□ -1.86
CDX1P47902 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 CYCSP45-201ENST00000402289 315 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL049693.1-201ENST00000402760 611 ntBASIC3.42□□□□□ -1.86
CDX1P47902 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 RPL30P2-201ENST00000414021 291 ntBASIC3.42□□□□□ -1.86
CDX1P47902 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 AC083875.1-201ENST00000419509 405 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDX1P47902 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 AC091390.1-201ENST00000433904 331 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 AL354941.1-201ENST00000438600 464 ntBASIC3.42□□□□□ -1.86
CDX1P47902 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 AC002381.1-201ENST00000447049 280 ntBASIC3.42□□□□□ -1.86
CDX1P47902 PAXBP1P1-201ENST00000449315 447 ntBASIC3.42□□□□□ -1.86
CDX1P47902 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 snoU13.8-201ENST00000458890 104 ntBASIC3.42□□□□□ -1.86
CDX1P47902 RN7SL93P-201ENST00000463035 293 ntBASIC3.42□□□□□ -1.86
CDX1P47902 RPL21P104-201ENST00000464143 478 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC109327.1-201ENST00000471666 403 ntBASIC3.42□□□□□ -1.86
CDX1P47902 MTND2P14-201ENST00000482139 351 ntBASIC3.42□□□□□ -1.86
CDX1P47902 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL024509.2-201ENST00000493462 493 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC104685.1-201ENST00000502445 371 ntBASIC3.42□□□□□ -1.86
CDX1P47902 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDX1P47902 MTCYBP43-201ENST00000513621 740 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC010342.1-201ENST00000514047 877 ntBASIC3.42□□□□□ -1.86
CDX1P47902 MTCO2P32-201ENST00000514865 403 ntBASIC3.42□□□□□ -1.86
CDX1P47902 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.42□□□□□ -1.86
CDX1P47902 RN7SKP122-201ENST00000515923 296 ntBASIC3.42□□□□□ -1.86
CDX1P47902 RNA5SP73-201ENST00000516744 108 ntBASIC3.42□□□□□ -1.86
CDX1P47902 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 AC084824.1-201ENST00000550917 1005 ntBASIC3.42□□□□□ -1.86
CDX1P47902 PSMB7P1-201ENST00000556349 514 ntBASIC3.42□□□□□ -1.86
CDX1P47902 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.42□□□□□ -1.86
CDX1P47902 RNU6-88P-201ENST00000606801 100 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.42□□□□□ -1.86
CDX1P47902 MIR6716-201ENST00000613413 80 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC114781.5-201ENST00000615297 108 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC140725.3-201ENST00000616193 880 ntBASIC3.42□□□□□ -1.86
CDX1P47902 MIR6891-201ENST00000618788 93 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL596245.1-201ENST00000618994 362 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AL445264.1-201ENST00000621719 171 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC007546.2-201ENST00000623996 360 ntBASIC3.42□□□□□ -1.86
CDX1P47902 AC011944.2-201ENST00000624440 683 ntBASIC3.42□□□□□ -1.86
CDX1P47902 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.42□□□□□ -1.86
CDX1P47902 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDX1P47902 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms