Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD4P46934 MIR5680-201ENST00000577577 84 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 MIR4512-201ENST00000583257 77 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD4P46934 AL583856.2-201ENST00000606298 543 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AL157817.1-201ENST00000614264 790 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AC105227.2-201ENST00000615075 605 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AC243756.2-201ENST00000618406 463 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.82□□□□□ -1.8
NEDD4P46934 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEDD4P46934 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD4P46934 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD4P46934 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD4P46934 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NEDD4P46934 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NEDD4P46934 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.81□□□□□ -1.8
NEDD4P46934 ANAPC10P1-201ENST00000395991 556 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL449283.1-202ENST00000418249 604 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL353705.1-201ENST00000433468 480 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC023347.2-201ENST00000433994 462 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 USP9YP24-201ENST00000434374 697 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 CST9LP2-201ENST00000437612 320 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 ISCA1P2-201ENST00000438679 421 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.81□□□□□ -1.8
NEDD4P46934 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.81□□□□□ -1.8
NEDD4P46934 USP9YP17-201ENST00000444617 696 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 HMGB1P48-201ENST00000446155 598 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 GAPDHP39-201ENST00000481866 979 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 RN7SL504P-201ENST00000494496 287 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD4P46934 RN7SKP96-201ENST00000516948 297 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.81□□□□□ -1.8
NEDD4P46934 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 HIGD1AP6-201ENST00000521833 279 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AP001372.4-201ENST00000524889 472 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 OR10V3P-201ENST00000525712 725 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD4P46934 AC004217.3-201ENST00000551552 878 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.81□□□□□ -1.8
NEDD4P46934 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 AL132857.1-201ENST00000555180 708 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.81□□□□□ -1.8
NEDD4P46934 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.81□□□□□ -1.8
NEDD4P46934 AC091488.1-201ENST00000604239 660 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL392112.1-201ENST00000605115 829 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL157392.4-201ENST00000609756 345 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AL138478.1-201ENST00000612252 832 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC092628.2-201ENST00000622492 339 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC067852.7-201ENST00000623270 535 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC026422.1-201ENST00000623961 452 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 AC004972.1-201ENST00000623934 2209 ntBASIC3.81□□□□□ -1.8
NEDD4P46934 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD4P46934 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD4P46934 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NEDD4P46934 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.81□□□□□ -1.8
NEDD4P46934 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NEDD4P46934 RNU6-619P-201ENST00000365146 108 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
NEDD4P46934 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NEDD4P46934 RNU6-1151P-201ENST00000384684 107 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AL079342.2-201ENST00000403367 482 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD4P46934 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD4P46934 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.8□□□□□ -1.8
NEDD4P46934 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD4P46934 AC104978.1-201ENST00000449387 391 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC233982.1-201ENST00000451247 436 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC010468.1-201ENST00000461022 817 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC126121.1-201ENST00000482313 553 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD4P46934 AC108078.3-201ENST00000502633 489 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.8□□□□□ -1.8
NEDD4P46934 AC113420.1-201ENST00000507903 571 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.8□□□□□ -1.8
NEDD4P46934 AC023632.1-201ENST00000518463 375 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD4P46934 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD4P46934 AC044913.1-201ENST00000557200 430 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC009101.1-201ENST00000568135 242 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AP000238.1-201ENST00000608759 426 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AL592148.2-201ENST00000612210 372 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AL442067.2-201ENST00000614033 363 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC010975.3-201ENST00000618727 978 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 MIR3651-201ENST00000630427 90 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC087821.2-201ENST00000637086 450 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
NEDD4P46934 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NEDD4P46934 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD4P46934 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD4P46934 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.8□□□□□ -1.8
NEDD4P46934 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NEDD4P46934 XPOTP1-201ENST00000443317 2398 ntBASIC3.8□□□□□ -1.8
NEDD4P46934 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms