Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC093014.1-201ENST00000548926 724 ntBASIC3.34□□□□□ -1.87
CASQ1P31415 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.34□□□□□ -1.87
CASQ1P31415 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.34□□□□□ -1.87
CASQ1P31415 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.34□□□□□ -1.87
CASQ1P31415 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.34□□□□□ -1.87
CASQ1P31415 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.34□□□□□ -1.87
CASQ1P31415 AC104785.1-201ENST00000603220 588 ntBASIC3.34□□□□□ -1.87
CASQ1P31415 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.34□□□□□ -1.87
CASQ1P31415 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.34□□□□□ -1.87
CASQ1P31415 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CASQ1P31415 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CASQ1P31415 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
CASQ1P31415 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CASQ1P31415 RNVU1-3-201ENST00000364313 161 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 Z86062.1-201ENST00000406773 777 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 AL645937.1-202ENST00000421799 937 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 AC068135.1-201ENST00000446164 246 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CASQ1P31415 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.33□□□□□ -1.88
CASQ1P31415 RPL23AP31-201ENST00000456160 467 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 ACTR3P3-201ENST00000480448 893 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CASQ1P31415 MTCO3P42-201ENST00000509488 518 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.33□□□□□ -1.88
CASQ1P31415 GMPSP1-201ENST00000514075 579 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 MTCO3P39-201ENST00000514812 518 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CASQ1P31415 OR5AK3P-201ENST00000527486 1297 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.33□□□□□ -1.88
CASQ1P31415 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CASQ1P31415 CR383656.6-201ENST00000550518 394 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.33□□□□□ -1.88
CASQ1P31415 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.33□□□□□ -1.88
CASQ1P31415 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.33□□□□□ -1.88
CASQ1P31415 AC242628.1-201ENST00000606810 391 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.33□□□□□ -1.88
CASQ1P31415 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CASQ1P31415 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CASQ1P31415 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CASQ1P31415 OR5H2-201ENST00000355273 945 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 RNU6-989P-201ENST00000362756 107 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
CASQ1P31415 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CASQ1P31415 SNORD21-201ENST00000383953 95 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
CASQ1P31415 UBE2V1P5-201ENST00000440070 405 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AL645638.1-201ENST00000440519 361 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 RBMY2UP-201ENST00000453474 324 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 RPS4XP6-201ENST00000477670 797 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AC096751.1-202ENST00000502691 1067 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 MIR2116-201ENST00000517221 80 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.32□□□□□ -1.88
CASQ1P31415 HAUS1P3-201ENST00000523909 662 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.32□□□□□ -1.88
CASQ1P31415 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.32□□□□□ -1.88
CASQ1P31415 OR8R1P-201ENST00000543943 764 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.32□□□□□ -1.88
CASQ1P31415 AC128657.1-201ENST00000549459 145 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AC084033.1-201ENST00000550830 633 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 AP005205.1-201ENST00000563503 508 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.32□□□□□ -1.88
CASQ1P31415 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
CASQ1P31415 AC023043.3-201ENST00000593113 385 ntBASIC3.32□□□□□ -1.88
CASQ1P31415 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASQ1P31415 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CASQ1P31415 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.32□□□□□ -1.88
CASQ1P31415 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CASQ1P31415 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CASQ1P31415 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.31□□□□□ -1.88
CASQ1P31415 RPL21P17-201ENST00000397467 475 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 SNORD88.1-201ENST00000408684 91 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.31□□□□□ -1.88
CASQ1P31415 AL513477.1-202ENST00000417061 214 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AL121578.1-201ENST00000428051 892 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AC073063.1-201ENST00000434352 607 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC108734.1-201ENST00000439549 399 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CASQ1P31415 PRDX3P4-201ENST00000470828 747 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 MLLT10P2-201ENST00000506434 249 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.31□□□□□ -1.88
CASQ1P31415 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC090666.1-201ENST00000578241 445 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 ZNF415P1-201ENST00000582279 1166 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.31□□□□□ -1.88
CASQ1P31415 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.31□□□□□ -1.88
CASQ1P31415 AC025588.3-201ENST00000604182 274 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 AC005972.3-201ENST00000606304 481 ntBASIC3.31□□□□□ -1.88
CASQ1P31415 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms