Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU2-16P-201ENST00000410712 136 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC007899.1-201ENST00000412776 775 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC016712.1-201ENST00000431088 378 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 RPS24P1-201ENST00000438550 371 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 DNAJC19P1-201ENST00000455312 319 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 CFTRP1-201ENST00000456646 183 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 RNA5SP246-201ENST00000458909 119 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC010469.1-201ENST00000463864 576 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOBP13765 RN7SL481P-201ENST00000477764 299 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC106872.3-201ENST00000495104 446 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC090453.1-201ENST00000495560 436 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC113430.1-201ENST00000506872 718 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 POU5F1P7-201ENST00000508759 541 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 SNORD116-26-201ENST00000516006 96 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 RNA5SP154-201ENST00000516193 111 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 IGHV3-32-201ENST00000519182 355 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 OR5M7P-201ENST00000526140 972 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AL391156.1-201ENST00000554965 554 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC091489.2-201ENST00000566263 604 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC007599.1-201ENST00000568688 1174 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 RPL23AP87-202ENST00000573039 466 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 MIR4284-201ENST00000578924 81 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC012065.4-201ENST00000602445 679 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC078795.2-201ENST00000602835 1252 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC079089.3-201ENST00000603094 673 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC080078.2-201ENST00000603766 501 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC090948.2-201ENST00000607363 564 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 MIR6748-201ENST00000610433 71 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC131238.1-201ENST00000617135 328 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 FAM157B-203ENST00000639350 358 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOBP13765 MARK2P15-201ENST00000432204 2186 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC116667.1-201ENST00000604855 2072 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DOBP13765 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DOBP13765 GDI2P1-201ENST00000429312 1336 ntBASIC3.69□□□□□ -1.82
HLA-DOBP13765 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOBP13765 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC011155.1-201ENST00000316512 456 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 RNU6-1119P-201ENST00000384349 108 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 OR6C69P-201ENST00000394268 893 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AL512430.2-201ENST00000406786 339 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 MIR320C1-201ENST00000408566 88 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOBP13765 RNA5SP104-201ENST00000410989 118 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AL160275.2-201ENST00000412010 394 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 TPMTP2-201ENST00000414372 726 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 FNDC3CP-201ENST00000420795 1155 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 RPL23AP38-201ENST00000423801 469 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 HMGB3P9-201ENST00000441799 583 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 USP9YP29-201ENST00000445112 563 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 CDC27P1-201ENST00000445384 715 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 ELOCP30-201ENST00000447108 299 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 MTCO1P27-201ENST00000448269 226 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 PAXBP1P1-201ENST00000449315 447 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 SSXP1-201ENST00000453640 473 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 USP9YP34-201ENST00000453983 808 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 SNRPFP4-201ENST00000456366 242 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC017015.1-201ENST00000477387 286 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 AP000797.1-201ENST00000478870 387 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 HMGB1P21-201ENST00000502313 581 ntBASIC3.68□□□□□ -1.82
HLA-DOBP13765 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DOBP13765 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms