Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
ITGA4P13612 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.35□□□□□ -1.55
ITGA4P13612 AP001284.1-201ENST00000528393 2118 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ITGA4P13612 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 RNU2-50P-201ENST00000410494 143 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RPL6P29-201ENST00000414863 865 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AL590139.1-201ENST00000416267 400 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.35□□□□□ -1.55
ITGA4P13612 AC008850.1-201ENST00000427546 362 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AL606489.2-201ENST00000433886 234 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC119618.1-201ENST00000434191 222 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.35□□□□□ -1.55
ITGA4P13612 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 RPS29P33-201ENST00000456717 146 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RPL23AP56-201ENST00000460778 453 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 APOOP2-201ENST00000461561 539 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RN7SL738P-201ENST00000470264 297 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC008897.1-201ENST00000494006 347 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 FTH1P24-201ENST00000503502 462 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC093767.1-201ENST00000504523 156 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC104057.1-201ENST00000515547 497 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RNU6-835P-201ENST00000516974 104 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RNU6-1220P-201ENST00000517126 108 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 HIGD1AP5-201ENST00000529959 259 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 ARL2BPP2-201ENST00000550907 489 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 AC123786.2-201ENST00000603459 275 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 RPL23AP92-201ENST00000603609 255 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AC025449.1-201ENST00000603896 529 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 uc_338.18-201ENST00000615451 175 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 AL049794.2-201ENST00000616301 365 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.35□□□□□ -1.55
ITGA4P13612 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ITGA4P13612 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 CKAP2P1-201ENST00000555477 2049 ntBASIC5.35□□□□□ -1.55
ITGA4P13612 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ITGA4P13612 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
ITGA4P13612 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
ITGA4P13612 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ITGA4P13612 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ITGA4P13612 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC010329.2-201ENST00000595195 2737 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AC097714.1-201ENST00000511272 1647 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ITGA4P13612 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC108467.2-201ENST00000617640 1597 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ITGA4P13612 MTCO1P7-201ENST00000419523 1542 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 ZNF680P1-201ENST00000436625 1469 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.34□□□□□ -1.55
ITGA4P13612 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 Y_RNA.72-201ENST00000362894 103 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 Y_RNA.142-201ENST00000363491 102 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 MIR192-201ENST00000384915 110 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 RPL31P52-201ENST00000407532 367 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 RNA5SP118-201ENST00000410385 109 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.34□□□□□ -1.55
ITGA4P13612 SDCBPP3-201ENST00000419629 891 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.34□□□□□ -1.55
ITGA4P13612 REREP1Y-201ENST00000422655 198 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 OR2B7P-201ENST00000429302 934 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AL590233.1-201ENST00000430017 456 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 FTLP19-201ENST00000433300 394 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.34□□□□□ -1.55
ITGA4P13612 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 REREP2Y-201ENST00000439103 200 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.34□□□□□ -1.55
ITGA4P13612 AL691482.1-201ENST00000453255 87 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AURKAPS2-201ENST00000454983 333 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC006463.2-201ENST00000473326 348 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 HMGB3P16-201ENST00000508037 287 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.34□□□□□ -1.55
ITGA4P13612 AC093677.1-201ENST00000514414 678 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 RPS27AP18-201ENST00000515536 459 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 Y_RNA.675-201ENST00000516389 149 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AC022616.3-201ENST00000523940 148 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 AP001880.2-201ENST00000538233 448 ntBASIC5.34□□□□□ -1.55
ITGA4P13612 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.34□□□□□ -1.55
ITGA4P13612 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms