Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL356218.2-201ENST00000605264 187 ntBASIC4.06□□□□□ -1.76
PCNAP12004 AC103710.3-201ENST00000608157 948 ntBASIC4.06□□□□□ -1.76
PCNAP12004 AC090116.1-201ENST00000615679 446 ntBASIC4.06□□□□□ -1.76
PCNAP12004 AC009090.3-201ENST00000616553 565 ntBASIC4.06□□□□□ -1.76
PCNAP12004 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.06□□□□□ -1.76
PCNAP12004 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCNAP12004 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCNAP12004 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PCNAP12004 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCNAP12004 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.06□□□□□ -1.76
PCNAP12004 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 ZNF833P-201ENST00000424938 1494 ntBASIC4.05□□□□□ -1.76
PCNAP12004 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.05□□□□□ -1.76
PCNAP12004 AL133383.2-201ENST00000622958 2336 ntBASIC4.05□□□□□ -1.76
PCNAP12004 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 RNU6-289P-201ENST00000364093 107 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RNA5SP509-201ENST00000364577 119 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RNU6-723P-201ENST00000383973 107 ntBASIC4.05□□□□□ -1.76
PCNAP12004 MT-TH-201ENST00000387441 69 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RNU6-952P-201ENST00000391164 108 ntBASIC4.05□□□□□ -1.76
PCNAP12004 SNORA26.8-201ENST00000391306 124 ntBASIC4.05□□□□□ -1.76
PCNAP12004 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 RPS15AP38-201ENST00000413110 372 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AC092647.1-201ENST00000420654 287 ntBASIC4.05□□□□□ -1.76
PCNAP12004 PSMA2P3-201ENST00000429685 675 ntBASIC4.05□□□□□ -1.76
PCNAP12004 MTND4P6-201ENST00000438297 472 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RPL23AP46-201ENST00000438548 490 ntBASIC4.05□□□□□ -1.76
PCNAP12004 KATNBL1P3-201ENST00000443475 909 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.05□□□□□ -1.76
PCNAP12004 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC022034.3-201ENST00000471393 478 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AL024509.2-201ENST00000493462 493 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
PCNAP12004 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AC114981.1-201ENST00000503897 678 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
PCNAP12004 MTCO3P44-201ENST00000510977 541 ntBASIC4.05□□□□□ -1.76
PCNAP12004 KCTD9P2-201ENST00000512203 1013 ntBASIC4.05□□□□□ -1.76
PCNAP12004 NDUFA5P2-201ENST00000519723 344 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 AC060788.1-201ENST00000521318 469 ntBASIC4.05□□□□□ -1.76
PCNAP12004 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCNAP12004 AC063950.1-201ENST00000552036 308 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.05□□□□□ -1.76
PCNAP12004 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.05□□□□□ -1.76
PCNAP12004 HSPE1P3-201ENST00000559254 309 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC040904.1-201ENST00000590850 223 ntBASIC4.05□□□□□ -1.76
PCNAP12004 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AC244505.7-201ENST00000599675 272 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AF131215.7-201ENST00000602443 707 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC020910.2-201ENST00000603635 610 ntBASIC4.05□□□□□ -1.76
PCNAP12004 MTCYBP22-201ENST00000603788 447 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC008745.1-201ENST00000604064 271 ntBASIC4.05□□□□□ -1.76
PCNAP12004 RNA5SP108-201ENST00000605921 117 ntBASIC4.05□□□□□ -1.76
PCNAP12004 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AL159169.3-201ENST00000608871 561 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC073114.1-201ENST00000612027 490 ntBASIC4.05□□□□□ -1.76
PCNAP12004 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 AC025588.4-201ENST00000615802 908 ntBASIC4.05□□□□□ -1.76
PCNAP12004 MIR7702-201ENST00000621931 59 ntBASIC4.05□□□□□ -1.76
PCNAP12004 AC008443.7-201ENST00000622195 246 ntBASIC4.05□□□□□ -1.76
PCNAP12004 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.05□□□□□ -1.76
PCNAP12004 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 AL359893.1-201ENST00000447628 1580 ntBASIC4.05□□□□□ -1.76
PCNAP12004 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCNAP12004 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.05□□□□□ -1.76
PCNAP12004 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
PCNAP12004 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.04□□□□□ -1.76
PCNAP12004 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCNAP12004 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.04□□□□□ -1.76
PCNAP12004 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.04□□□□□ -1.76
PCNAP12004 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCNAP12004 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCNAP12004 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCNAP12004 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCNAP12004 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCNAP12004 SNORD116-9-201ENST00000384000 95 ntBASIC4.04□□□□□ -1.76
PCNAP12004 SNORD116-3-201ENST00000384287 95 ntBASIC4.04□□□□□ -1.76
PCNAP12004 SNORD116-7-201ENST00000384404 95 ntBASIC4.04□□□□□ -1.76
PCNAP12004 SNORD116-5-201ENST00000384462 95 ntBASIC4.04□□□□□ -1.76
PCNAP12004 RN7SKP56-201ENST00000410513 331 ntBASIC4.04□□□□□ -1.76
PCNAP12004 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.04□□□□□ -1.76
PCNAP12004 VN1R108P-201ENST00000431580 830 ntBASIC4.04□□□□□ -1.76
PCNAP12004 THAP5P1-201ENST00000439089 262 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms