Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 RPL7L1P13-201ENST00000511702 739 ntBASIC3.13□□□□□ -1.91
THRAP10827 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.13□□□□□ -1.91
THRAP10827 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.13□□□□□ -1.91
THRAP10827 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.13□□□□□ -1.91
THRAP10827 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.13□□□□□ -1.91
THRAP10827 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.13□□□□□ -1.91
THRAP10827 AC100814.1-201ENST00000606963 623 ntBASIC3.13□□□□□ -1.91
THRAP10827 AL162274.2-201ENST00000614406 332 ntBASIC3.13□□□□□ -1.91
THRAP10827 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
THRAP10827 AC092184.1-201ENST00000625042 715 ntBASIC3.13□□□□□ -1.91
THRAP10827 AC084035.1-201ENST00000634543 607 ntBASIC3.13□□□□□ -1.91
THRAP10827 AC083865.1-201ENST00000636634 831 ntBASIC3.13□□□□□ -1.91
THRAP10827 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.13□□□□□ -1.91
THRAP10827 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
THRAP10827 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
THRAP10827 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
THRAP10827 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
THRAP10827 Y_RNA.111-201ENST00000363248 100 ntBASIC3.12□□□□□ -1.91
THRAP10827 MIR607-201ENST00000385241 96 ntBASIC3.12□□□□□ -1.91
THRAP10827 PRRC2CP1-201ENST00000404428 159 ntBASIC3.12□□□□□ -1.91
THRAP10827 RPL23AP47-201ENST00000408017 460 ntBASIC3.12□□□□□ -1.91
THRAP10827 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
THRAP10827 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
THRAP10827 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
THRAP10827 PSMA2P3-201ENST00000429685 675 ntBASIC3.12□□□□□ -1.91
THRAP10827 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.12□□□□□ -1.91
THRAP10827 RPL21P112-201ENST00000434403 463 ntBASIC3.12□□□□□ -1.91
THRAP10827 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
THRAP10827 RPL23AP33-201ENST00000442301 452 ntBASIC3.12□□□□□ -1.91
THRAP10827 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.12□□□□□ -1.91
THRAP10827 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.12□□□□□ -1.91
THRAP10827 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
THRAP10827 RPL23AP23-201ENST00000452590 471 ntBASIC3.12□□□□□ -1.91
THRAP10827 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.12□□□□□ -1.91
THRAP10827 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.12□□□□□ -1.91
THRAP10827 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
THRAP10827 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
THRAP10827 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.12□□□□□ -1.91
THRAP10827 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
THRAP10827 RPL31P13-201ENST00000484151 370 ntBASIC3.12□□□□□ -1.91
THRAP10827 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
THRAP10827 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
THRAP10827 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.12□□□□□ -1.91
THRAP10827 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.12□□□□□ -1.91
THRAP10827 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
THRAP10827 AC016877.3-201ENST00000606778 504 ntBASIC3.12□□□□□ -1.91
THRAP10827 AC004775.1-201ENST00000607389 753 ntBASIC3.12□□□□□ -1.91
THRAP10827 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.12□□□□□ -1.91
THRAP10827 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
THRAP10827 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
THRAP10827 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
THRAP10827 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
THRAP10827 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 AL512646.1-201ENST00000269395 1077 ntBASIC3.11□□□□□ -1.91
THRAP10827 MIR422A-201ENST00000362286 90 ntBASIC3.11□□□□□ -1.91
THRAP10827 RNU6-600P-201ENST00000362524 99 ntBASIC3.11□□□□□ -1.91
THRAP10827 RNU6-252P-201ENST00000363232 107 ntBASIC3.11□□□□□ -1.91
THRAP10827 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
THRAP10827 BTBD10P2-201ENST00000404779 676 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC241520.1-201ENST00000422654 1099 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.11□□□□□ -1.91
THRAP10827 AC093151.1-201ENST00000427711 313 ntBASIC3.11□□□□□ -1.91
THRAP10827 DPPA2P1-201ENST00000428060 556 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC068135.1-201ENST00000446164 246 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC089999.1-201ENST00000460336 374 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC025181.1-201ENST00000477507 416 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
THRAP10827 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.11□□□□□ -1.91
THRAP10827 C1DP5-201ENST00000525775 383 ntBASIC3.11□□□□□ -1.91
THRAP10827 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
THRAP10827 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.11□□□□□ -1.91
THRAP10827 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.11□□□□□ -1.91
THRAP10827 AL163153.1-201ENST00000554223 283 ntBASIC3.11□□□□□ -1.91
THRAP10827 SERPINE4P-201ENST00000554978 281 ntBASIC3.11□□□□□ -1.91
THRAP10827 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 AC006539.2-201ENST00000601729 572 ntBASIC3.11□□□□□ -1.91
THRAP10827 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.11□□□□□ -1.91
THRAP10827 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
THRAP10827 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
THRAP10827 AC011978.2-201ENST00000569835 2054 ntBASIC3.11□□□□□ -1.91
THRAP10827 MTCO1P24-201ENST00000515438 1558 ntBASIC3.11□□□□□ -1.91
THRAP10827 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
THRAP10827 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
THRAP10827 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
THRAP10827 SNORA51.12-201ENST00000384448 134 ntBASIC3.1□□□□□ -1.91
THRAP10827 AL122016.1-201ENST00000403365 367 ntBASIC3.1□□□□□ -1.91
THRAP10827 AL353692.2-201ENST00000407054 335 ntBASIC3.1□□□□□ -1.91
THRAP10827 TATDN1P1-201ENST00000414123 891 ntBASIC3.1□□□□□ -1.91
THRAP10827 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.1□□□□□ -1.91
THRAP10827 CKS1BP5-201ENST00000434172 273 ntBASIC3.1□□□□□ -1.91
THRAP10827 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.1□□□□□ -1.91
THRAP10827 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.1□□□□□ -1.91
THRAP10827 AC007000.2-201ENST00000442564 487 ntBASIC3.1□□□□□ -1.91
THRAP10827 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.1□□□□□ -1.91
THRAP10827 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.1□□□□□ -1.91
THRAP10827 SNORA59A-201ENST00000459326 152 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms