Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.8□□□□□ -1.8
COL2A1P02458 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL2A1P02458 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
COL2A1P02458 AL365361.1-201ENST00000566942 3481 ntBASIC3.8□□□□□ -1.8
COL2A1P02458 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL2A1P02458 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
COL2A1P02458 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 Y_RNA.51-201ENST00000362725 102 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL2A1P02458 AL121978.1-201ENST00000402778 359 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RNU4-22P-201ENST00000411058 166 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AL445213.1-201ENST00000412589 747 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC007899.1-201ENST00000412776 775 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 AL356968.1-201ENST00000416622 474 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 PTP4A1P5-201ENST00000420305 455 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC011233.1-201ENST00000422812 283 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 MTND2P20-201ENST00000440805 661 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 Z99127.3-201ENST00000448158 395 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 ATG12P2-201ENST00000456830 416 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RPS6P4-201ENST00000494693 758 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 SUMO2P4-201ENST00000504193 276 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC093755.1-201ENST00000512950 1023 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RNU6-491P-201ENST00000516099 110 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC012213.3-201ENST00000577199 777 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC121247.2-201ENST00000604776 136 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC007998.5-201ENST00000622938 237 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC104985.3-201ENST00000623479 597 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 ELL2P3-201ENST00000457883 1602 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL2A1P02458 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RNU6-729P-201ENST00000384399 107 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RNU6-192P-201ENST00000391253 100 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AL589994.1-201ENST00000404962 340 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AL008987.1-201ENST00000415528 237 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RPS3AP44-201ENST00000425466 790 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 UBE2D3P1-201ENST00000436669 444 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 EXTL2P1-201ENST00000446218 416 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RPL7P59-201ENST00000447700 943 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 RPL7P55-201ENST00000450522 746 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 NPM1P13-201ENST00000452663 865 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AL133477.1-201ENST00000457472 514 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 RPL7P48-201ENST00000461513 746 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 MTND4LP3-201ENST00000468320 276 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.79□□□□□ -1.8
COL2A1P02458 CYCSP20-201ENST00000473154 315 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 RPS3AP22-201ENST00000488297 769 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 FABP5P6-201ENST00000510588 409 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC119751.1-201ENST00000513357 765 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC008885.1-201ENST00000514930 301 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 LRRC6P1-201ENST00000532188 885 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AL391156.1-201ENST00000554965 554 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.79□□□□□ -1.8
COL2A1P02458 AC109446.2-201ENST00000567872 497 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.79□□□□□ -1.8
COL2A1P02458 NTAN1P1-201ENST00000603150 646 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 AC015849.2-201ENST00000605738 409 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 MIR622-201ENST00000638396 96 ntBASIC3.79□□□□□ -1.8
COL2A1P02458 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL2A1P02458 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL2A1P02458 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL2A1P02458 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.78□□□□□ -1.8
COL2A1P02458 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL2A1P02458 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms