Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR16-1-201ENST00000385271 89 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1BO75841 RPS7P15-201ENST00000415804 584 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 MRPL50P2-201ENST00000416821 482 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 RPS6P14-201ENST00000425165 719 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC104332.2-201ENST00000429959 156 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.7□□□□□ -1.98
UPK1BO75841 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 GOT2P5-201ENST00000433995 546 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1BO75841 TRIM60P18-201ENST00000441518 828 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 BTBD7P2-201ENST00000441962 620 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC004022.1-201ENST00000447766 1066 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AL034418.1-201ENST00000448675 860 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 CDC42P1-201ENST00000456658 548 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 OR6K1P-201ENST00000456766 971 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 RPS17P11-201ENST00000474297 293 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC007686.1-201ENST00000488511 463 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 RN7SL20P-201ENST00000488827 297 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1BO75841 FTH1P21-201ENST00000512179 511 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC019227.1-201ENST00000526902 510 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1BO75841 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC107016.2-201ENST00000547968 190 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.7□□□□□ -1.98
UPK1BO75841 MTCO1P40-201ENST00000574371 625 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.7□□□□□ -1.98
UPK1BO75841 ARF4P1-201ENST00000605447 541 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
UPK1BO75841 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
UPK1BO75841 AL110115.1-201ENST00000614396 364 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC097460.3-201ENST00000623099 442 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC040168.1-201ENST00000623594 991 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 AC095031.1-201ENST00000623685 672 ntBASIC2.7□□□□□ -1.98
UPK1BO75841 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
UPK1BO75841 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
UPK1BO75841 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
UPK1BO75841 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1BO75841 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
UPK1BO75841 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1BO75841 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1BO75841 RNVU1-6-201ENST00000364688 164 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 OR1L1-202ENST00000373686 1083 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 MIR30B-201ENST00000384850 88 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 RNU6-821P-201ENST00000390995 107 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1BO75841 GSTA8P-201ENST00000404253 637 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 RNU6-712P-201ENST00000410558 100 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AL139128.1-201ENST00000413921 941 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 AL606495.1-201ENST00000422100 813 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1BO75841 UBE2D3P2-201ENST00000424409 445 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 FAM204CP-201ENST00000424489 642 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1BO75841 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC234064.1-201ENST00000436312 247 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AL590762.3-201ENST00000436372 640 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1BO75841 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 AL353718.1-201ENST00000451028 517 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1BO75841 NDUFA5P7-201ENST00000452914 242 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AP000705.1-201ENST00000454567 350 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.69□□□□□ -1.98
UPK1BO75841 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1BO75841 RNU7-140P-201ENST00000459546 60 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 RN7SL385P-201ENST00000468873 276 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 RPL32P9-201ENST00000487963 407 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
UPK1BO75841 HMGB1P1-201ENST00000522557 636 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC007991.1-201ENST00000522680 631 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1BO75841 LSM6P2-201ENST00000552208 177 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.69□□□□□ -1.98
UPK1BO75841 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
UPK1BO75841 ZNF415P1-201ENST00000582279 1166 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
UPK1BO75841 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.69□□□□□ -1.98
UPK1BO75841 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms