Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNORD39.3-201ENST00000584451 71 ntBASIC3.37□□□□□ -1.87
TRIM3O75382 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM3O75382 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM3O75382 AL136370.1-201ENST00000608166 691 ntBASIC3.37□□□□□ -1.87
TRIM3O75382 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM3O75382 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRIM3O75382 AC010872.1-201ENST00000624225 675 ntBASIC3.37□□□□□ -1.87
TRIM3O75382 AP000553.6-201ENST00000641242 118 ntBASIC3.37□□□□□ -1.87
TRIM3O75382 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM3O75382 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 RNA5SP235-201ENST00000365411 114 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 SNORD116-23-201ENST00000384645 92 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 MIR23B-201ENST00000384832 97 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 MT-TC-201ENST00000387405 66 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM3O75382 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 RPS3AP9-201ENST00000417027 792 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM3O75382 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM3O75382 AL389915.1-201ENST00000422463 466 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 OSTCP5-201ENST00000425293 453 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 C1DP1-201ENST00000426049 402 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AC096632.1-201ENST00000427395 310 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 HMGN2P20-201ENST00000437531 273 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 RPS3AP46-201ENST00000448352 682 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 COX6CP18-201ENST00000448769 222 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 AC104982.1-201ENST00000478775 574 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 GAPDHP39-201ENST00000481866 979 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC104057.1-201ENST00000515547 497 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC092470.1-201ENST00000546187 132 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AL109653.1-201ENST00000603091 248 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AL445435.1-201ENST00000604232 665 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AL392048.1-201ENST00000613946 534 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 AL034408.1-202ENST00000636088 415 ntBASIC3.36□□□□□ -1.87
TRIM3O75382 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM3O75382 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM3O75382 AC117529.2-201ENST00000512159 2068 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM3O75382 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM3O75382 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM3O75382 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM3O75382 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM3O75382 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TRIM3O75382 SAGE4P-201ENST00000442271 3381 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM3O75382 RNU6-50P-201ENST00000362356 103 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 RNU6-236P-201ENST00000363886 106 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 RNU6-115P-201ENST00000364310 107 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 Y_RNA.493-201ENST00000384422 102 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 MIR649-201ENST00000384843 97 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 MIR449B-201ENST00000384995 97 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRIM3O75382 SKINT1L-201ENST00000401057 817 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 AL583834.1-201ENST00000406943 343 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 RPS7P9-201ENST00000414704 586 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 FCF1P2-201ENST00000415284 583 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM3O75382 MRPS18BP2-201ENST00000434310 759 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 B3GNT2P1-201ENST00000434960 952 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 PTGES3P1-201ENST00000439531 483 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 VN1R34P-201ENST00000447387 883 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 RPS24P6-201ENST00000452670 400 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 MRPL42P4-201ENST00000453267 443 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 PTGES3P5-201ENST00000455109 434 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 snoU13.24-201ENST00000458998 104 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 AL136126.1-201ENST00000473603 402 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM3O75382 DYNLL1P6-201ENST00000503440 264 ntBASIC3.35□□□□□ -1.87
TRIM3O75382 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM3O75382 AC010265.1-201ENST00000513509 211 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms